Oncorhynchus mykiss (rainbow trout): 110521489
Help
Entry
110521489 CDS
T07259
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy00514
Other types of O-glycan biosynthesis
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110521489
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110521489
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110521489
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110521489
Glycosyltransferases [BR:
omy01003
]
O-Glycan biosynthesis
O-linked Gal type
110521489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
110521489
NCBI-ProteinID:
XP_021454748
Ensembl:
ENSOMYG00000002201
LinkDB
All DBs
Position
30:complement(19300075..19329004)
Genome browser
AA seq
622 aa
AA seq
DB search
MMLGMMPAVGAVGVGLFCALLVAIMPGGMSDIATLVQDPVRTESSLLKPKIMIAILARNA
AHSLPHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEQP
KSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPRILNLLMAE
NLTLVAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLR
RDASRELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDE
EKESFTHTIAEAMIDHNIAPSEYLYNPQIPQDKMGFDEIFLINLKRRLDRRQRMLSTMTS
LGLQATLTDAVDGKALNTSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWVQLV
ERGLSKVLVLEDDVRFEPRFKRRMMTIMEEVEKAQLDWDLIYVGRKRMQVRQPERSVEGV
NNLVEADYSYWTLGYALSAQGARKLLAAQAFNKMLPVDEFLPVMFNKHPNSDFMSHFEPR
DLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRQHQHARKTEQQGRIHT
VAQNSVTGDSPPPAARSTRDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgggaatgatgcctgcggttggagccgtgggagtcgggctgttctgcgcgcta
cttgtcgccatcatgcccggtggcatgtcagacatagcgactctggtgcaggatccggtc
cgaaccgaatcgtccctgctgaagccaaaaatcatgatcgccattctggctcgcaacgcg
gcgcacagcctgccgcactacctgggctgcatcgacaggctagactacccgaaggagcgg
atcgctatttgggcagcgacagaccacagtgtggacaacagcacagccatgctgagggag
tggctgaagcaggcccaggaccagtaccactatgtggagtggagacccatggagcagccc
aagtcctatactgatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtg
atgaagctgaggcaggctgctctgaaggcagcacgggaacgctgggcagattatatactg
tttgcagacagtgataacctgctgaccaaccccaggatcctgaacctactcatggctgag
aacctgactctggtggctcccatgctggagtctcgctctctctactccaacttctggtgt
ggcatcactccccagggttactataagcgtactccagactaccagccaatcagggagtgg
aagcgtctgggttgcttcgccgtacccatggtgcactctacattcctgttagacctgagg
cgtgacgccagtcgggagctggccttctacccccctcaccctgactacagctgggccttc
gatgacatcatggtattctccttctccgcccgacaggcagatgtccagatgtatgtgtgt
aacagagaacactatggcttcctgccggttcctctgaaggcctcacagaatgttgacgag
gagaaggagagcttcacacacactatcgctgaggccatgattgaccacaacatagcgccc
tcagagtacttgtacaatccccagattccgcaggacaagatgggctttgatgagatcttc
ctgatcaatctgaaacgtcgtctggacaggagacagagaatgttgagcaccatgacctct
ctgggtctgcaggccacccttactgacgcagtggatggcaaggctctgaacacttctcaa
ctgcaggcgttgggtatagagatgattccaggttatcaggacccatactctggccgtgtt
ctaaccagaggagagataggctgcttcctcagccaccactccacctgggtacagttggtg
gagcgtggtctttccaaggtgctggtgttggaggatgatgtgaggtttgagcccagattt
aagaggcgaatgatgaccatcatggaggaagtagagaaggcccagctggactgggatctc
atctatgtggggcgtaagcgtatgcaagtgcgtcagccggagcgttcagtggaaggggtt
aataacctggtggaggcggactactcgtattggacgctgggctatgctctgtcagcgcag
ggtgccaggaagctgctggctgctcaggccttcaacaagatgctacctgttgatgagttc
ctccccgtcatgttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgg
gatctgaaggccttctccgtggaacccctcctcctctaccccacccactacacgggcgag
ccaggctacgtcagcgacacagagacctccaccatctgggacgacgaggccaccgccacc
gactgggaccgccagcaccagcatgccaggaagacagaacagcaaggccgcatccacacc
gtggcccagaacagtgtgacgggagactcacctccacccgctgcccgctccacacgagac
gaactctga
DBGET
integrated database retrieval system
