Oncorhynchus mykiss (rainbow trout): 110521492
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Entry
110521492 CDS
T07259
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04130
SNARE interactions in vesicular transport
omy04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110521492
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110521492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110521492
Membrane trafficking [BR:
omy04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
110521492
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
110521492
NCBI-ProteinID:
XP_021454752
Ensembl:
ENSOMYG00000004335
LinkDB
All DBs
Position
30:19430388..19438939
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFHKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggctgatggactgccgctggccgcatcaatg
caagaggacgaacagttgggtcgggacctgcaacagtaccagagccaggctaaacagctg
ttcaggaaactcaatgaccagagtcccacacgttgcacattagaggctggctccatgtcc
ttccactacgtcatagaaaaaggagtggtctacctagtgctgtctgaagcaagctttcac
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaggtccccactgtgtcccgaccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcgtacatagacagccgagcccgcaggaacctgggcagcatcaacaca
gagctgcaggatgtccagaggatcatggtggccaacattgaggaagtgttgcaacgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcgaagaagtac
agaagtgacgccaagtacctgaacactcgctccacctatgctaagctggctgccggaggg
gtcttcttcatcatgctcatcgtctatgtccgcttctggtggctctga
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