Oncorhynchus mykiss (rainbow trout): 110521580
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Entry
110521580 CDS
T07259
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110521580
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110521580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
MCP_V20_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110521580
NCBI-ProteinID:
XP_021454894
Ensembl:
ENSOMYG00000031988
UniProt:
A0A8C7SSQ2
LinkDB
All DBs
Position
30:complement(23612719..23622387)
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AA seq
1221 aa
AA seq
DB search
MSVTISGIMAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFG
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNG
VVFLQSPFSAQVSPGQGKSMTSPAVSATGSSVAEVGSAQSEAVASPESIYSSSGPPEPPS
RLSLPLPSRESPSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQVHCVINMKEQLEVKESRGHGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKR
SLFTGSSLTGKDHLKRAEDEDMSKQSKKRPRPMLLPHMTPLLKKKMKFSCSKDQSFASVG
KHGVLREFTFFDKLRRFFKSREVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYT
QFKSFLGDKELSHSVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTA
ICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES
VQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVV
LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIES
VYDERQEQSTEEGGVVQQGRDGSSAPAVSDPHMVFTYEDKQILEDAASLIIYHVKRQPTI
HKDDKDHIKRIIQHFVPDLFFSRRGELSETEEWTDEDVEERGDRGGGCGGIPGVVATTGS
QQHQHQQQNGESRRRRCASPQTVELGVASSHSLAPVGGEKVDLRDPEAEHQKELDGVYNL
FFVNNNWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAECRDLAMELRLKQ
PSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNIIRQLQ
HLVSDEVCLQVAELYLAERKRGAAGANLSSQCVRTAWETSYQWKSERVMAEENCFKVMFI
QNQGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQNEGYFFKPVFLPRN
LRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGAL
VKARKSQHRVAVNQHERFDKWHQGWLVEHVTPAAERSVHDWLIGEEEEDMIPCKTTCLNT
QVKGLPVNRYQVHYSRKPPSP
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactatctccgggatcatggcgaaaatacaggcacacagcaacacgaaacaa
ataaaccaaattcaagacaaggcctatgttgtacaaaagcaagtgcaacaacagcacttt
caaaaactgaaggttgaagatgccctatcatacctggaccaagtcaaaatacgatttggg
aatgaccctggaatatacaacaaatttcttgacataatgaaagaattcaaatcacaaagc
attgacacaccgggtgttataaaccgtgtgtctcagctcttccatgggcacccggacctc
gtcttaggattcaatgccttcctgcccccagggtatcggatagagattcccaagaatggc
gtggttttccttcagtccccattctctgcccaggtgtccccaggtcaggggaagagtatg
acaagccctgctgtgagtgccacaggctcatctgttgctgaagttggatctgcccaaagt
gaagctgtggcatcgcctgaaagcatctactcatcctcagggcccccagagcctcccagt
agactgtccttgccactccccagcagagagagcccatcccagccacagtcctcctcagtg
tccccccctgcctcagagcccagcccagtagaatttgacagtgctatcagctatgtcaac
aaaatcaaaaaccgcttcctagaccatccagagatctacagatccttccttgagatacta
cacacttaccaggtacactgtgtcatcaatatgaaagagcagcttgaggtcaaggagagc
cggggtcatggtagtagtggaatgacagaggatgaagttttctcaaaagtggccagcctc
ttcaagggccaagaggacttactggctgagtttggacagttcttaccagatgctaagaga
tcactgttcactggcagctccctgactgggaaagaccacctgaagagggcagaggacgag
gacatgagcaaacagagcaagaagagacccaggcccatgctgctgcctcacatgacacca
ctgctcaagaaaaagatgaagttttcatgctccaaagaccagtcctttgcctcagttggg
aagcatggagtcttgcgggagttcacattttttgacaagcttcgccgtttcttcaagagt
cgggaggtatacgagaacttcctccgctgtattgctttgtttaaccaggaagtggtttcg
ggagcagagctgctgcagcttgtcactccctttctggggaagtttccagagctatatacc
cagttcaagtcttttctgggggacaaagagctctctcattcagtgtctggcctgtcagac
cgatacatggaaggaggtgggggcagggaggtcgactatgcctcttgcaagcgcctggga
tccagctacagagcactacccaagacttaccagcagcccaagtgcagcggtcgcactgct
atctgcaaagaggtgctgaatgacacctgggtttctttcccctcgtggtcggaagactct
acgtttgtgagctcaaagaaaactccatatgaggagcagcttcatcgctgtgaggacgaa
aggtttgagttggatgtggtcctggagactaacctggccaccatccgggtcctggagagc
gttcagaagaagctgtcccgtctgtcgcctgaggaccaggaccgcttccgtctggacgat
tgtctgggaggcacatctgaggtcatccagcgccgagccatctaccgtatctacggcgac
aaggcccctgagattatagaggggctgaagaggagccccgctactgccgtgcctgtggtg
ctcaagagattgaaagcgaaggaggaggagtggagagaagcccagcagggcttcaacaag
atctggagggagcagtatgagaaggcctacctcaagtccctggaccaccagggggtcaac
ttcaagcagaatgacatgaaggcccttcgatccaaaagcctgctcaatgagattgaaagt
gtttatgatgagcgtcaggagcagagcacagaggaggggggcgtggtccagcaggggcgt
gacgggagcagtgcgccagcggtcagcgatccccacatggtgttcacctacgaggacaag
cagatcctggaggacgccgcctctctcatcatctaccatgtcaaacgccagcccaccatc
cacaaggacgacaaggaccacatcaagcgcatcatccagcactttgtccccgacctcttc
ttctcccgccgcggcgagctcagcgagacggaggagtggacggacgaggacgtggaggag
agaggagaccggggaggaggatgtggcggtataccaggagtcgtagcaacaacaggcagt
cagcaacatcagcatcagcagcagaacggggagtcgaggcggcggcgctgcgcctctccc
cagacagtggagctgggtgtagcctcgtcccatagcctggctccagtgggaggggagaag
gtggacctgagagaccctgaggcagagcaccagaaggagctggacggagtctacaacctg
ttcttcgtcaacaacaactggtacttcttcctgcggcttcaccagaccctgtgccagcgg
ctgctgagggtgtaccggcaggcggagaggcaactgctggagcaccgggcagagcagaat
cgtgagaggcttctgatggccgagtgccgggacctggccatggagctccgcctcaaacag
cccagtgaggtagaactggaggagtactacccagcgttcctggatatggtgcgcagtctt
ctggatgggaacctggagtccacacagtatgaggacacattgcgggagatgttcaccatc
cacgcctacattggcttcaccatcgacaagctcatccagaacatcattagacagctgcag
cacctggtgagtgacgaggtgtgtcttcaggtggctgagctgtacctggccgagaggaag
aggggcgcggcgggggctaacctgtcatcccagtgtgtgagaacagcctgggagaccagc
taccagtggaagtcggagagggtcatggctgaggagaactgctttaaggtaatgttcatt
cagaaccaaggccaggtgaccttgaccattgagctgctggacacagaggaggcccaggct
gatgacccattggatgtacagtgcctgtccagctatatggaacagtttgtagggacagag
tcaacgctttgctcacagaacgaaggctactttttcaaaccggtatttttgcccaggaac
ctgaggcacttcagacgctggcaggtgcggcaggtggaggcgatgcgctgcagacgggag
tggcacagacagctgggtgtggagagtgctggcagtctggactgccgctttaaactcaac
acccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccgaggagcgctg
gtcaaagccaggaagtcccagcacagggttgctgtgaaccagcacgagcgctttgacaag
tggcaccagggctggctggtggagcacgtgaccccggcggctgagcgctcggtccacgac
tggctcataggtgaggaggaggaggacatgattccgtgcaagaccacctgcctcaacaca
caggtcaaaggcctgcctgtcaaccgataccaggtgcattacagtaggaaacctccctct
ccgtag
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integrated database retrieval system
