Oncorhynchus mykiss (rainbow trout): 110521582
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Entry
110521582 CDS
T07259
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03030
DNA replication
omy03410
Base excision repair
omy03420
Nucleotide excision repair
omy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110521582
03410 Base excision repair
110521582
03420 Nucleotide excision repair
110521582
03430 Mismatch repair
110521582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110521582
03036 Chromosome and associated proteins [BR:
omy03036
]
110521582
03400 DNA repair and recombination proteins [BR:
omy03400
]
110521582
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110521582
DNA Replication Termination Factors
ELG1-RFC complex
110521582
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110521582
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110521582
Check point factors
HRAD17(Rad24)-RFC complex
110521582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_30
AAA_22
AAA_assoc_2
AAA_11
Mg_chelatase
DUF815
RuvB_N
SLFN-g3_helicase
AAA_24
AAA_14
AAA_28
AAA_5
AAA_19
Gp44_lid
ResIII
RPA_interact_N
Cdc6_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
110521582
NCBI-ProteinID:
XP_021454899
Ensembl:
ENSOMYG00000032148
LinkDB
All DBs
Position
30:complement(23649029..23659489)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGAGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
KGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLEICYKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKSLVDGADEYLQMLSLCSVILQQATQSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatctactcaaggcaccagacctctgaaagagaaaggt
gccgggaccagtggagagaagaagcagaagtctgtcccctgggttgagaaatatagacca
aaatgtatggaagaggtggcatttcaagaggaggtggttgctgtgctgaagaaaactata
aagggcgccgatctccccaatctgctgttctatggaccacctggaacaggaaagacatcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtcctg
gaactgaacgcctctgatgagagagggattcaggtggtcagagagaaagtcaagagattt
gcccagctgactgtagcaggacaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaacgctgctcaagctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactatgtcagcaggatt
attgagccattgacatccagatgctcaaaattccgcttcaaacctctggccaatcaggtc
caagaagagcgcctgctagaaatctgttacaaggagaatctcaagtactcgaaggaggga
attgcagcgttggtgaaggtttcagagggggatctgagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagtgcggtcatagagatagca
ggggttgttccccccaagatgatcgacaatttgcttaaaatctgttacaagggcacattt
gaaaaactagagattgctgttcggaacatggtagatgaaggctatgccgccacacagatc
atcaaccagctacacgaagccatcatagaggaagagctgaacgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgataagagtctagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcttgcagcaagccacccagagtaactga
DBGET
integrated database retrieval system
