Oncorhynchus mykiss (rainbow trout): 110521648
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Entry
110521648 CDS
T07259
Name
(RefSeq) F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110521648
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110521648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
LRR_6
Hemerythrin
F-box
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
110521648
NCBI-ProteinID:
XP_021455016
Ensembl:
ENSOMYG00000001178
LinkDB
All DBs
Position
30:complement(27544152..27559964)
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AA seq
681 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCTVYNVHSDNKLSEMLSLFEKGLKSVKSEYEQLNYARQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDLKKQVMAQHCSQQRWDCAAEVLKGLSLWSQA
EELHKAFKYADHEKTDELEKELCSTHISQLPTEILLHLFRYLGPEDLCHCGQVSSAWSDL
AKTGSLWRHLYPVRWARGDHYRGPPADLNQEPDEEWVKSLQDEGKAYQEWDEDADVDESD
ETCEDSLAISSAQREKKLLNEIIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPNL
THLDLTQTDVTDSAFDSWSSLGACPSLEHLDLSGCEKITDHTLKKLSISQKRSDRQAKLL
KSPPPISLLDERILHLMGGSKQALIFKQRMGTRCSSPSRVWVLDPSELADIEDAAEWNRR
GGVSTPEGRGFVATKPGGLCCCRRSRRRGLRTSYSTSYWQQQYGLGEACCGHSTCCTGEM
ALRTCGGLQCLSYTTRGSAGAEFWTKCSSGGQRCLELYNRTDQSDARRSLRFLSLSGCYR
VTDLGLRALSQRGGLPFLEHLNLSGCLLITEVGLQELVSACPALNDEHFYYCDNINGPHA
DTASGCQNLQCGFRACCRSGE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttttcccgacgaggtggatgtttttactggtccacattggcgaatgaaacag
ttggtaggactttactgcgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcactgtgtgccaccttcaaggagttcaagatgcacgaacagatt
gaaaacgagtatatcatcggcctgttgcaacagcgcagctgcactgtgtataatgtgcac
tccgataacaagctctcagagatgttgtccctgtttgagaaaggcctgaaaagcgttaag
agcgagtatgagcagctgaactatgcccggcaactgaaagagcgactggaggcattcaca
caggacttcttaccccacatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacatatgaggagctgaaagacctcaagaagcaggtgatggcacagcactgtagc
cagcagcgatgggactgtgcagcagaagtgctgaaggggctcagtctgtggagccaggca
gaggagctgcacaaggccttcaagtatgctgaccacgagaagactgacgagctagagaaa
gagctgtgctccacccacatctcccagctacctacagagatcctgctgcatctgttccgc
tacctgggtcctgaggacctgtgtcactgtggccaggtgtcctcagcctggtccgacctg
gccaagaccggctctctgtggaggcacctctaccctgtacgctgggccagaggggatcac
tatcgtggccccccagctgatctgaatcaggaaccggatgaggagtgggtgaagagtctg
caggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtctgat
gagacttgtgaagactcattggctataagctcagctcagagggagaagaagctactgaat
gaaattatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctggcc
tacagctctacggtctccagtaagatggtgcgtcagatccttagtctctgtcctaatctc
acccacctggacctcactcagactgatgtcacagactccgcctttgacagttggtcatct
ctgggggcatgtccatctcttgagcacctggacctatccggctgtgagaagatcactgac
cacaccctgaagaagctgtccatttctcagaaacgatctgaccggcaagccaagcttctg
aagagcccgcctccgattagtctgctggatgagcggatcctccatttgatggggggcagc
aagcaggccctgatcttcaagcagcgtatggggacacggtgcagcagcccctccagggtc
tgggtcctggacccttcggagctggccgacatagaggatgcagcagagtggaaccgccgc
gggggagtgtctacccctgaggggcgaggctttgtggcgacgaagccaggaggtttgtgt
tgctgcaggaggagtaggaggcggggcctcaggacaagctatagcacctcctactggcag
cagcagtatgggcttggggaggcctgctgtggccattcaacctgctgcactggtgagatg
gccctgaggacttgtggagggctgcagtgtttgtcttacaccaccaggggcagtgcaggg
gcagagttttggactaaatgctcctctgggggccagcggtgcctggagctttacaacaga
actgatcagtcagacgctcgacgctcgctgagattcctcagcctctctggatgctatcgg
gttacagacctgggtttgagggcgctgtctcagcgtggtggtcttcctttcctggagcat
ctgaacctgtctggatgtctcctcatcactgaggttgggctacaggagctggtgtcagcc
tgtcctgccctcaatgatgaacacttctactactgcgacaacatcaacggtccccatgct
gatacggccagcggctgccagaacctgcagtgtggcttcagggcctgctgccgctctgga
gagtga
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