Oncorhynchus mykiss (rainbow trout): 110521849
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Entry
110521849 CDS
T07259
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110521849
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
110521849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
DUF5119
Motif
Other DBs
NCBI-GeneID:
110521849
NCBI-ProteinID:
XP_021455452
Ensembl:
ENSOMYG00000022409
UniProt:
A0A8C7R7D8
LinkDB
All DBs
Position
30:43104346..43127082
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AA seq
1049 aa
AA seq
DB search
MVHVYNCHPFASQQIVQAEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVVKLERLPGSAPTQKSADKKSQDHCLVPKDMI
TGAEHNNEIEVRKEGLAGHLDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGI
LAITYILYRRFAPDFFQGCSVEDTRLHSLQFHPVFTSNQEVCAEGGRGVEPTCVFCFFSL
PNTGYVYSVRGGVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDPERAARRNLN
RKSSSTKPRDPIEMSRGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPRVGNPVEQPQSSDQNLAQSLGYTTTDKIGSTTDRTIDRQELQQAFQESCA
HLGDCFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEE
TMEELTEETANKVLDIFGVAEPSQLPHVIASPSMVRASPDSGLAHLERLESIGAPSVPLT
LSKAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTLLARHLRDSQ
EGLLVAAMVALHENNKVKLDEADLFFQKLCGNLSGPQGGPQLLVDFWEALLMASLQEAVI
QELLFRLTSVYIDRVTRRDSHGMKPLKTADDLINSCSHYGVPYPWVSILTPAHFSIIQDH
QEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRC
PQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAGGENTILLSALKETLVVVAMELNPL
EFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatcccttcgcttcccagcaaatcgtgcaagccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgtcctcttatctgccgcttcgccacc
atggggactgtgcagagcatcctgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggccgag
aagacacgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtggg
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtgggctgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcgatctgtgcggggtacattgcc
ctgcaggcagagctcgaagtgctggtggtcaagctggagagacttcctggctccgcccct
acccagaagtcagctgacaagaagtcccaggaccactgtctagtccccaaggatatgatc
actggagcagaacacaacaatgagatagaggtgaggaaagagggtcttgctggtcacctt
gatcaggatgacttcttcatattccctaagcaccaggagctgctgggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggtatc
ctcgctatcacctatatcttatacagacgttttgctccagacttcttccaaggctgcagt
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccagtaaccaggaa
gtgtgtgctgagggggggagaggggtggagccgacgtgtgtattctgtttcttctcgctg
cccaacacgggctacgtgtacagcgtgaggggtggagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggctgtcctcactgacctcttcctccacatcatcaccaag
aatgctctccagtgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctgttcattggtctaaaggctctgtgtcacgatcgccaccacatcgtcctgcta
accgctgcagacgtggagaccagggaggacccagagagggcagctcgcaggaacctgaac
aggaagtcatcctccaccaagccccgggatcccattgagatgagtcgcggctggaatcta
tacgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
ctcctcctgagagccacgctcctggacccccgggtgggaaatccagtggagcagcctcag
agcagtgaccagaacctagcccagtccctgggatatacaacaacagacaaaataggcagc
accactgacagaacaatagacagacaggagctacagcaggccttccaggagagctgtgca
catttaggagactgcttcagtaggtttgataagcgtgactgccacctggccctgccctac
tataagatgtcaggcctgtctgtgacagaggtgatctccaggaacaggtgtctgtccagc
agcccctgtggctatgggaaggggttcctcttcttcctcaaacactcactctatgaggag
accatggaggagctcactgaggagacagccaacaaggtgctggatatcttcggtgtggct
gagccgtctcagctcccccatgttatagccagcccctccatggtcagagccagccctgac
agtggcctggcccacctagagcgcctggagtccatcggagccccctctgtacccctcact
ctctccaaggctgccctggccctccgcatgggagacctgcagctctacagacaacacatg
gacagacacacagagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctg
catggcagagggcacacggtggtgcccaccctcctggcacgccacctcagggacagccag
gaaggtctgctggtagcagccatggttgcgctacacgagaataacaaggtcaaactggac
gaggctgacctcttcttccagaagctttgtgggaacctgtcagggccccagggaggccct
cagctgctggtggacttttgggaggccctgctgatggcctcattacaggaagctgtcatc
caggagctgctgttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagc
cacggcatgaaaccactcaagaccgcagacgacctgatcaactcatgttctcactatggt
gtgccatatccctgggtcagcatcctgactccagctcacttcagtatcattcaagatcac
caggaggacctccagaaactacagtccctgctgtgcggtcccaccctggatgtgtcgtcc
atcctgcccctgttggagcagctgccagacggggacaacgcggggctaagtgtgcacttg
ctctgtgccaccaagctggaccgccacgagagctccatcgagaggcttctagaccgatgt
cctcaggcaatcatcccctatgctaaccacgagctgcagaataacaaaatgactctgtgg
tggcagaaactgtttcctgagctgtgtgagagaaccagagcagcagggggagagaacacc
atcttactgtctgcactcaaagaaacgctggtggtggttgccatggagctgaatccactg
gagtttctggacctgttgcctgatgacgggacggcacacttcttcctgcctcacctgctg
gagtgcagccagagaaatctcatgacgtaa
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