KEGG   Oncorhynchus mykiss (rainbow trout): 110521869
Entry
110521869         CDS       T07259                                 
Name
(RefSeq) claudin-18
  KO
K06087  claudin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272  Virion - Hepatitis viruses
omy04382  Cornified envelope formation
omy04514  Cell adhesion molecules
omy04530  Tight junction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    110521869
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110521869
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110521869
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110521869
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:omy03037]
    110521869
   04147 Exosome [BR:omy04147]
    110521869
   04515 Cell adhesion molecules [BR:omy04515]
    110521869
Cilium and associated proteins [BR:omy03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110521869
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110521869
  Exosomal proteins of colorectal cancer cells
   110521869
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  L1 family
   110521869
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 Amastin
Other DBs
NCBI-GeneID: 110521869
NCBI-ProteinID: XP_021455474
Ensembl: ENSOMYG00000040168
UniProt: A0A060XK37
LinkDB
Position
30:complement(43650217..43657562)
AA seq 257 aa
MGTSVIQQIGFILGVLGQFFVSAATAMDMWGLQDRSFSVITSVYTYSGLWKSCVENSSGM
TQCRPYFTILGLPVMLQAVRALMIVGIVLGAIGCLIAIFALKSLKMGNMEDNAKATMTLT
SGVMFLLAGVCGIAGVSVFANLIVSSFRFTTYADSGYGGEGVLGGLGGSLTPRYTFGTAL
FVGWIGGAVLVIGGVMMCIAFRGMIPSKEKRHGYGVAYKAASQHTTVYKDDAKPRLAYDE
SFRAQIMNGRHSNQQYV
NT seq 774 nt   +upstreamnt  +downstreamnt
atgggcacctcagtgattcagcaaatcggcttcattctgggtgtgttgggccagtttttc
gtatctgctgctacagccatggatatgtggggtttacaggaccggtccttctcagtcata
acaagtgtttacacttactctggactctggaaatcatgtgtagaaaactcatctggaatg
acccaatgcaggccttattttaccatactagggctgccagttatgctccaagcggtgcgg
gcactgatgatagttgggatagttctgggagccatcggctgtctgatcgccatctttgcc
ctcaagagcctgaagatgggaaatatggaggataatgccaaggctaccatgacactgacc
tctggggtcatgtttctgcttgcaggtgtctgtggcattgctggagtgtctgtctttgcc
aacctaatcgtgtccagcttccggttcaccacctatgcagacagtggatatggaggagaa
ggagtactgggaggacttggaggatctctcactcccaggtacacctttggcaccgccctc
ttcgtggggtggataggcggggctgtgttggtcataggaggagttatgatgtgtatcgcc
ttcagagggatgattccatcaaaggagaagcgacatggttatggggtggcctacaaagct
gcgtcccaacacacaacagtgtacaaggatgacgcgaaacccagactcgcctatgacgag
tctttcagagcccagattatgaatggaagacactccaaccagcaatatgtgtga

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