Oncorhynchus mykiss (rainbow trout): 110522026
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Entry
110522026 CDS
T07259
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110522026
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110522026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
ASA1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR19_1st
CFAP251_N
WDR54
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
110522026
NCBI-ProteinID:
XP_021455763
Ensembl:
ENSOMYG00000001142
LinkDB
All DBs
Position
4:8319746..8327014
Genome browser
AA seq
664 aa
AA seq
DB search
MLFRSIVDRGVRKRRRNDLSPKYPLSSLLNGYQCARHDEHISYGNMGVAVPPFGCAFSTA
RGLQSVFAVANEEGVLRLYNTDNRQSPVLKEWMAHENAVFDLAWVPGEASLVTASGDQMA
KLWDVASGELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQV
KQISGAHNKTDRNTPSNTKKRRSGTRGMAPSVDSQQSVTVVLFRDAHTLISSGAVDGIIK
MWDLRKSYTAYHHDPIPLQVYPYPGSSTRKLGYSGLVLDSTGSNLFSNCIDDNIYMFNVS
GLKTTPVAVFAGHLNSSFYVKSTVSPDDQFLASGSSDHHTYIWKISDPKQVPMMLQGHKQ
EVTSIAWCPTDFTKIASCSDDNTVRIWRLDRGTDGAKSSVGEANLVGWAYPKPATTVSIP
RPLNHMESTPAKSPQAGSLGALSSPQPAACSGSRADVPLPSSTTTFSTLQGAKATLLCQK
TPSSIRNWFSRTPGSPWGQVTSPLHTVLSPQGPTGTTPSERRAKRRLETGDCGAAGGCDG
AGECNCITELYPAAKSSRGLAGMCRPSQEPPQAGTERSEAWEGADLQVEDPSTQADKENH
SPGGADWLSVMSQRLRKGAGNTSSIPRSPIACKRRDGRMPTSPAMRSPRSMQKISSYFRQ
KTLE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgctccattgttgacagaggagtccgtaaacggaggcgcaatgacctcagc
ccaaagtacccgttgtcctccctgctgaacggctaccagtgtgcacggcatgatgaacac
atctcatacgggaacatgggggtagccgtgcccccttttggatgcgccttctctacagct
cgagggttgcagagtgtatttgctgtggccaacgaggagggtgtcttgaggctctacaac
acagataacagacagagtccagtcctgaaagaatggatggcacacgagaatgctgtcttt
gaccttgcttgggtgccaggggaggctagcttggtgactgcatcaggtgatcagatggcc
aagctgtgggacgtggcatcgggggaactccttggcagcttcaaggggcaccagtgcagc
ctcaaatctgttgcattcacacagcaggagaaagctgtgttctgtactgggggccgagat
gggaatattatggtctgggacaccaggtgcagcaaaaaagatggattctacaggcaggtg
aagcagatcagcggggctcacaataagacggatagaaacacaccctctaacacgaagaag
agacgctcaggcacacgtggcatggccccctctgtggactcccagcagagtgtcactgtg
gtgctgttccgtgatgcacacaccctcatctcttcaggagctgttgatgggataatcaag
atgtgggaccttcggaaaagctacactgcataccaccacgaccccataccactccaggtg
tacccgtacccaggctccagcacacgaaagctaggttactcggggctggtgttggactcc
accggctccaacctgttctccaactgcatcgacgacaacatctacatgtttaacgtcagt
ggattgaaaaccactccagtggcagtcttcgctggtcacctaaactcctcgttttacgtc
aagtccactgttagcccagacgaccagttcctggctagtggctcaagtgaccatcataca
tacatctggaagatctccgacccaaagcaggttcctatgatgcttcagggccataagcag
gaagtgacctccatcgcgtggtgcccaacagatttcacaaagattgcttcctgctctgac
gacaacaccgtacggatctggcgtctggaccgggggacggatggagcaaagtcctctgtc
ggagaggccaatctggtgggctgggcatatcctaaacctgccaccaccgtgtccattcca
aggcctttgaaccacatggaatccaccccagccaagagtccccaggcagggagtctgggg
gccctgtcctccccccagcctgctgcctgctccggtagtagagccgacgtgcctctaccc
tccagcaccaccaccttctccacccttcagggtgctaaagccaccctcctatgccagaaa
acaccctcatccatcaggaactggttttcccgaacccccgggtctccttggggacaggtc
acctctcctctccacacagtgctcagcccccagggcccaaccggtactactccctcggag
aggagggccaagcgccgactggagacgggtgactgtggggcagcagggggctgcgatggt
gcaggggagtgcaactgcattacggagctctaccccgcagccaagagcagccgaggactg
gcaggcatgtgccgccccagccaggagccacctcaggcgggcacagagaggagtgaggcc
tgggaaggagcagacctccaggtggaggacccatccacacaggcagacaaggagaaccac
tctccaggtggggcagactggttgtcagtgatgagccagaggctgaggaagggtgcggga
aacaccagcagcattcccagaagccccattgcctgcaagaggcgagatggcaggatgccc
acctcaccggcaatgcgctctccacgatccatgcagaaaatatcctcctatttccggcaa
aagactttggagtaa
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integrated database retrieval system