Oncorhynchus mykiss (rainbow trout): 110522068
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Entry
110522068 CDS
T07259
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110522068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110522068
Membrane trafficking [BR:
omy04131
]
Exocytosis
Others
Others
110522068
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110522068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
CCDC39
DUF5798
CCDC192
AAA_13
GAS
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
110522068
NCBI-ProteinID:
XP_036832718
Ensembl:
ENSOMYG00000027434
LinkDB
All DBs
Position
1:36200301..36231196
Genome browser
AA seq
1120 aa
AA seq
DB search
MYGSARSVGRADANHSGGGRDAGRDGGSSQGSGRSPRLPRSPRMGHRRTNSTGGSGGCPG
GAGGKTLSMENIQSLNAAYATSGPMYLSDNEVAMSDRVNKSGREMTTMGRQRVTYGSRAS
AGGGGGVAASTPNIATSAPANAVLPGGMMAGDSLAFGDHHMASTVPHSLRQARDNTILDL
QAQLKEVLRENELLCREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQ
YRVVQDETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRELALNSEPTEENYRRLHGD
HERQAKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERT
RRLADAEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDAKINS
LERGLRDMEEEVMMLKSNGLLSCEERQEDMKQMEVYRSHTKFMKNKMDQVKQDMSRKDTE
LLGLQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKK
SKQIQEMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERV
KSLQTDTSNTDTALNTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKV
SLLQGDLSDRETNLLDLKEHASSLASSGLKKDSKLKSMEISLDHKKEECLKLENHLKRAQ
NATLEAKANTELSERITSLEQEVTRHREDSGKAQAEVDRLLEILREMENEKNDKDRKINE
LENQSSRQTKDQSKKVASLKHKEQVEKSRNARLVDEAKKREDNISESSQQVKDSLRLKTE
RIEELEEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSS
TQQSLCEKETHLTTLRAERRKHLEEVLEMKCRQEALLAAISEKDANIALLELSSSKKKKT
QDEVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIPPLLS
LSENRNKLKLYIAHLTDLCHDRDPSILSVLTPPPHYHHANPPAWEEELHKMTLEQLELEL
ELCEKESGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagcgcccgttccgttggccgagcggatgccaaccacagcggaggagggaga
gacgctgggagggatggggggagcagccagggttctgggcgctcccctcgtctcccccgc
tcaccacggatgggtcaccgtcgcaccaacagcacggggggcagcggaggatgtccaggc
ggagcggggggtaagaccctctccatggagaacatccagtccctcaatgcagcctacgcc
acctcaggacccatgtacctgagcgacaacgaggtcgccatgtccgaccgcgttaacaag
agcggtcgggagatgaccacaatggggcgacagagggtgacatacgggtcaagggcgagc
gcaggtgggggtggaggcgtggcagccagcacaccaaacatcgccacgtcggccccagcc
aacgctgtgctccctgggggaatgatggcaggtgactccctggcttttggggatcaccac
atggcctctacggtgccccactccctgagacaagcccgggataacaccatactggacctg
caggcccagctcaaagaggttctgcgtgagaatgagttgctgtgtcgtgaggtggaggtg
aaggagagcaagctgagttcctccatgaactccataaagaccttctggagccctgagctg
aagaaggagagagccctaaggaaggacgaggtgtccaagatcactgtctggaaggaacaa
taccgcgtggtgcaagacgagacacagcacctccacatgacggtccaggccttgcaggat
gaattgaggatccagagagacctgaaccagctgctccagcaggaccctgccagccagggt
cgcgaactggccctgaactctgaacccacggaggagaactaccggcggcttcatggggac
cacgagcgtcaggccaaggagctgttcctgctcagaaagaccctggaggagatggagctg
aggatagacacccagaaacagaccctgggtgccagggacgagtccatcaagaaactgctg
gagatgctgcagagcaaagggccgtcggctaaggcctcagaggaagaccaggagagaacc
aggagactggctgatgctgagatgcacagacaccatctagagtccctactggaccagaga
gacagggagacgactgctctacgagaggagctgcatcgtcgatacgagggaaccccagag
tccaccaaaaccaaggctctacagacagtcatcgacatgaaggatgctaagatcaactct
ctggagcgaggtctgagggacatggaggaggaggtgatgatgctcaagtccaacggcctg
ctgagctgtgaggagagacaggaggatatgaaacagatggaggtctaccgcagccacacc
aagttcatgaagaacaagatggaccaagtaaagcaggacatgtccaggaaggacacagag
ctgctaggtttacagaccaagctggagactctgaccaaccagttctctgatagcaaacag
cacattgaggtcctcaaggagtcgctgaccgctaaagaacaacgagcagccatcctacag
acagaggtggatgcgttgcgcctgcgactggaggagaaggagaccacgctgaacaagaag
agtaaacagatccaggagatgtctgaggagaagggcacgctcaacggagagatccacgac
ctcaaggacatgctggaggtcaaggagcgcaaggtcaacgtcctgcagaagaagattgag
aacctgcaggaacagctgagagacaaggagaagcagatgagcagcctgaaggagagagtc
aagtctctacagacagacacctctaacacagacacagctcttaacacactggaggagtcc
ctcgctgagaaggagcgcatcatcgagcgtctgaaggagcagagagaccgagacgacagg
gagaagactgaggagatcgacagcaacaagaaagaactgaaggatctgaaggagaaagtc
agtctgctgcagggagatctgtctgacagagagaccaatctgttggacctaaaggagcat
gcatcatccctggcctcctcggggctgaagaaggactccaagctgaagagtatggagatc
tctctggaccataagaaggaggagtgtctcaaactggagaaccatcttaagagggcccag
aatgcgactttggaggccaaggcaaacacggagctgtcggaacgcatcacctccctggag
caggaagtgacccgacacagagaggattctggcaaggctcaggcagaggtggaccggctg
ctggagatcctgagagagatggagaatgagaagaacgacaaggaccgcaagatcaacgag
ctggagaatcagtcctccaggcagaccaaggaccagagtaagaaggtggcgtccctgaaa
cataaggagcaggtggagaagagtaggaacgcccgactggtggacgaagctaaaaagaga
gaggacaacatctcagagagctctcaacaggtcaaggactctctgcggttgaagactgag
cgtatcgaggagttagaggaggctctgagggagagtgttcagattacagcagagagagaa
atggtgctggcacaggaggaagctgccaggaaccaccaggagaaacagattgaggagctg
ctgggggccatggagaaggttaaacaggagctggagtctatgagggccaagctatcatct
acccaacagtccctgtgtgagaaggagactcacctgaccactttgagggccgaacgcagg
aaacacctggaggaggtgctggaaatgaagtgcagacaggaggcgctgctggcagccatc
agtgagaaggacgccaacattgccctgctggagctgtcttcgtccaagaagaagaagacg
caggacgaggtggctctgctaaagagagagaaggaccgtctggtacaacagctcaaacag
cagactcagaaccgtatgaagctaatggcagacaactatgaggatgaccacttgaagacc
gctcccgaccagaccaatcacaaaccttctccagatcagatgatcccccctctcctgtcc
ctgagtgagaatcgcaataagcttaagctctacattgcccacctgactgacctctgccac
gaccgagaccccagcatcctcagcgtcctgaccccacccccccactatcaccacgccaac
ccaccagcctgggaggaggagctacacaagatgactttggagcagttggaactggagttg
gagttgtgtgagaaggagagcggggagctgcaggagtatgccaactcagtgctgcagcag
atcgctgactactgccctgacatcctggagcaggtggtcaacgcgctggaggagtcctgc
tga
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