Oncorhynchus mykiss (rainbow trout): 110522071
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Entry
110522071 CDS
T07259
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04382
Cornified envelope formation
omy04514
Cell adhesion molecules
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110522071
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110522071
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110522071
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110522071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110522071
04147 Exosome [BR:
omy04147
]
110522071
04515 Cell adhesion molecules [BR:
omy04515
]
110522071
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110522071
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
110522071
Exosomal proteins of colorectal cancer cells
110522071
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110522071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF4131
Motif
Other DBs
NCBI-GeneID:
110522071
NCBI-ProteinID:
XP_021455828
Ensembl:
ENSOMYG00000010979
LinkDB
All DBs
Position
4:complement(11023859..11035891)
Genome browser
AA seq
313 aa
AA seq
DB search
MASSAMQILAFALALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLSLPAYLQTARTTMVLSCMMACLGLCLAALGLKCTRWGGSHRAKGHAAIG
AGGCFILAGILCLVPASWFTNEVITTFLDSNVPESSKYEPGGAVYVTFLSAGLLLAGGVI
FCLSCPGKREGQLDYTSTSTSTTFPDKLLQQQINQEQIQRDQLQRDLIMREQLQRGQKDF
EQQTSPNEQSSREQLQWGDKGPQDEAHEADEIQQEEPLQEKPLHEDKGTQQFYSPSRVPP
KDARAGYSLQDYV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgccatgcagatcctcgcctttgccctggcgctgctgggcgtcctgggc
gccactgtggccacgctgctgcccaactggaaggtgagtgccgacgtgggctccaacatc
atgactgccatctcccagatgcaggggctgtggatggactgcacctggtacagcactggc
gtgttcagctgcaccttgaagtactccgtgctgtcgctgcccgcctacctgcagaccgcc
cggacgacaatggttctgtcgtgcatgatggcttgccttggcctctgtctcgctgcactg
gggctcaaatgtacccgctgggggggcagtcaccgggcaaagggacacgcggccatcggg
gcggggggttgcttcatcttggctggcatcctctgcttggtgcccgcttcctggttcacc
aacgaggtaatcactaccttcctggactccaacgtacccgagagcagtaaatacgaacct
gggggggccgtgtacgtgacctttctctctgccggcctactgctggccggtggggtcatc
ttttgtttgtcgtgtcccgggaaaagagaggggcagttggactatacgtcgacatccacc
tctaccacctttcctgacaaactactgcagcagcagataaaccaggagcaaatacagcgc
gaccagctccagcgtgacctgataatgcgggagcaactgcaacgggggcagaaggacttt
gaacagcagacgtcgcctaatgagcagtcaagccgcgagcagcttcaatggggtgacaaa
gggccccaggatgaggcccacgaagctgacgaaatccagcaggaggagcctctacaggag
aagcctctacatgaagacaagggaacgcaacagttctactctccatccagagtccctcca
aaagacgcccgggctggctacagcctgcaggactatgtttaa
DBGET
integrated database retrieval system