Oncorhynchus mykiss (rainbow trout): 110522078
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Entry
110522078 CDS
T07259
Name
(RefSeq) paired box protein Pax-1 isoform X1
KO
K09382
paired box protein 1/9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110522078
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110522078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_SB
HTH_29
Motif
Other DBs
NCBI-GeneID:
110522078
NCBI-ProteinID:
XP_021455838
Ensembl:
ENSOMYG00000011229
LinkDB
All DBs
Position
4:complement(11357550..11362895)
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AA seq
355 aa
AA seq
DB search
MVLWKHHTYGEVNQLGGVFVNGRPLPNSIRIRIVELAQLGIRPCDISRQLRVSHGCVSKI
LARYNETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADAVCDKYN
VPSVSSISRILRNKIGNLSQPGQYENSKPIHPQLSYNHMYPYSYPSAMSPTGTKIGSGPG
IPVTPGHVSLSRHGWPSVHTVSNILGIRAFMDPAAIAGAEGYPSKMEEWASVNRATFSSA
HGVNGIEKSSLEADIKFPQSSSNLSSYACAYSPPNQYGVYGGPANYMTTGHHWQSQSTSL
AHPNSEATMQGGDLHMAMSFKHSAREGDRKPPGPLSKHQHEALSVHGLSLPTSAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttggaaacatcatacatatggagaagtaaaccagcttggcggggtatttgtc
aacggacgaccacttccaaattcgattcggatcagaatcgtggaattagctcaacttgga
atacgaccgtgtgacatcagtagacagcttcgagtctctcatggctgtgtgagcaagata
ctagcgagatacaacgagacgggttcgatactgcccggtgccataggaggaagtaaaccc
cgggtcacaacacccaacgtggtgaaaagcataagggattacaaacaaggagaccctgga
atatttgcttgggagatcagggacaggcttcttgcagatgcagtgtgtgataagtataac
gttccctccgtcagctccataagccgtattttacgcaacaaaataggaaatctttcccag
ccgggccagtatgagaacagcaagccaatccatcctcagctctcctacaaccacatgtac
ccgtactcataccccagcgcaatgtcgcccactgggacaaaaattggcagcggtcccggt
ataccggtcacgccgggccatgttagcctctcccgccatggttggccttccgtgcacaca
gtcagcaacattttgggcatccgagccttcatggaccctgcagccatcgctggagctgag
gggtacccatcaaaaatggaggagtgggcgagcgtaaacagagcgacgttttcctctgcg
catggtgtcaacggaatagagaaatcctccctagaggcagacatcaagtttcctcagtct
tcttcaaacctatctagttatgcttgtgcctactctcccccaaaccaatacggggtgtat
ggtggaccagcaaactatatgacaacgggacaccactggcagtctcaaagcacaagtctt
gcccaccctaacagcgaagcaacgatgcaaggtggagacctccacatggcgatgtccttc
aaacactcagcacgagaaggagacagaaaacctcccggtcccttgagcaagcaccagcac
gaggcgttgagcgtacacggactatctctcccgacctccgcttcataa
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