Oncorhynchus mykiss (rainbow trout): 110522110
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Entry
110522110 CDS
T07259
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110522110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110522110
Ion channels [BR:
omy04040
]
Ligand-gated channels
GABA-A
110522110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
110522110
NCBI-ProteinID:
XP_021455910
Ensembl:
ENSOMYG00000001339
LinkDB
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Position
4:complement(12820195..12827767)
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AA seq
400 aa
AA seq
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MGRVKIRFELCIFAGPAVPVGVDVQVESLDTISEVDMDFTMTLYIRHYWKDERLSFHSTT
NKSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVLYSQRVTVTSMCS
MDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNNSLSTDENISLSQFLIQEFQTTSKL
AFYSSTGWYNRLYITFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGIT
TVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKEKKL
RERLPCTCGMTHPGMMGSYSEEDVNNTGNYGCMLEENGAMKQQRMMVHLDIEENNQITGH
VGSSAYSSMWVDTHAIDKYSRVIFPGSYTLFNIIYWSCYL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggtcaagatcagatttgagttgtgtatctttgcaggacctgctgttccagtt
ggagttgatgttcaggtggaaagtctggacacgatctcagaggttgacatggacttcacc
atgaccctgtatattagacactactggaaagacgagcgcctctctttccacagcaccacc
aataagagcatgacctttgacgggcgcctggtcaagaagatctgggtgccagacatgttc
tttgtccactccaagaagtctttcacacacgacaccaccacagataatgtcatgctgaga
gtctaccccgatggcaaggtgctctacagccaaagggtgacagtgacatcaatgtgcagc
atggacttgagtcgcttccctctggacacacagacctgctccctggagatcgagagctat
gcgtacacggatgacgatctgatgctctactggaagaaagggaacaattccctgagcact
gatgaaaatatctccctctcccagttcctcatccaggagttccaaaccacctcaaaacta
gccttctacagcagcacaggctggtacaaccgtctgtatatcaccttcaccctgcgacgc
cacatcttcttcttcctgctccagacctacttccctgcgactctgatggtcatgttgtcc
tgggtgtcgttctggatcgaccgtcgggccgtaccggccagggttcctctgggtatcacc
acggtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagggtttcc
tacatcaaagctgtggacatttacctctgggtcagctttgtgtttgtgttcctatcggtg
atagagtacgctgcagtgaactacctgtctacggtgcaagaacggaaggaaaaaaagcta
cgagaaaggctgccctgcacctgtggcatgacccacccgggcatgatgggcagctacagc
gaggaggacgtcaacaacacggggaactatggctgtatgctcgaggagaacggcgccatg
aagcaacagaggatgatggttcatctggacattgaggagaacaaccaaatcacaggacat
gtgggctccagtgcctacagcagcatgtgggtcgacacccacgccatagacaagtactcc
cgggtcatctttccagggtcgtatactctgtttaacatcatctactggtcctgctacctc
taa
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