Oncorhynchus mykiss (rainbow trout): 110522155
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Entry
110522155 CDS
T07259
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110522155
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110522155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
110522155
NCBI-ProteinID:
XP_021455980
Ensembl:
ENSOMYG00000012935
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Position
4:complement(14920366..14939272)
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AA seq
612 aa
AA seq
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MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCQTPTTTTPSILASRS
AYSSPQLIPRGCSSPQPSQPLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTDQHILHELEKRTILVYTPSRCVNGKR
VVCYDDRYIVKLAYESDGIVVSNDNYRDLQIERPEWKTFIEKRLLMYSFANDKFMPPDDP
LGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRAK
SKPTAQTDRERSFLPSGPSPALIQEVSQEAHTYTSPYELDLTTTHLYKYLSTPPPLIKEE
HSHSHRASPSDQFTSQRKTGSPVLHHRSSLRLCPSPDTDEAFSSLEASLSRLYVQDQTNN
TKGPVVSYTYSSGVANCSQHSGDFYPSSTSSSHSHASNQQRLSLGGPSSAWDAPQKLPQC
GCDDSQSFECSPCMYRHQHLQSQLGECSYAVHSNHIHFTEQQYFQSPPPQRQSNSLPEHS
PAQGLSGERVGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNMSELVP
LIQRFRISHIPF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgtgcgcgtgttggagagcctgcgccatgacgcccagaccaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccccatccatactagccagccgctca
gcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagccagccc
ctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttcgtgcct
ctgtggaggaaggagcagcccagtcccgaggcccccatgacagatcagcacatcctccat
gagctggagaagaggacgatcctggtgtacaccccgtcacgctgcgtcaacgggaagaga
gtggtgtgttacgacgaccgctacatcgtcaagctggcctacgagtccgacggcatcgtt
gtgtccaatgacaactacagagacctgcagatagagaggccagagtggaagacgttcata
gagaaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctccagatgatcct
ctgggaaggaatggcccaacgattgacaactttctgatgaaaaagcagtggaccccagaa
aacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgcaagttc
taccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgagagccaag
agcaaacctactgctcaaacagacagggaacggtcatttctcccctcaggccccagccct
gctctgatccaggaagtcagccaggaggcccacacttacacatccccttatgagctggat
ctaactacaactcatctatacaaatatctatccacaccgcctccccttataaaagaagag
cattcccattcccatagggcttcgcctagcgatcagttcaccagccagagaaaaacaggc
agcccagttctacaccacaggtccagcctccgcctctgccccagcccagacactgacgag
gccttcagctccctggaagcctccctgtccagactctatgtccaggaccagaccaacaac
accaagggcccagtggtgtcctacacctacagcagtggggtggccaactgcagccagcac
agtggggacttctacccttccagcacttccagtagccacagccacgccagcaaccaacag
aggctcagcctgggtggaccctcctcagcctgggatgccccgcaaaaactgccacagtgt
ggctgtgacgactcacaaagctttgagtgcagcccgtgcatgtacagacaccaacatctc
cagtcacagctaggagagtgctcctatgctgttcacagtaaccatatccatttcacagag
cagcagtacttccagagtcctcccccacaaaggcagagtaacagcctcccagaacacagc
ccggcacagggcctctctggcgagagagtggggatgaccaggtccaatggaggtaaagct
ccagagagtgagcagaggaggagtgtgaagaaccagctcagcaccctcttcccccacagc
atggtagactatgtgatgagtgtgtacccacacaccctcaatatgtcagagctggtgcct
ctgattcagaggttccgaatcagccacattcctttctaa
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