KEGG   Oncorhynchus mykiss (rainbow trout): 110522155
Entry
110522155         CDS       T07259                                 
Name
(RefSeq) probable ribonuclease ZC3H12D
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110522155
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110522155
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 110522155
NCBI-ProteinID: XP_021455980
Ensembl: ENSOMYG00000012935
LinkDB
Position
4:complement(14920366..14939272)
AA seq 612 aa
MDQQHGKVERFLKLGYSHSDIVRVLESLRHDAQTNDILEELIKTCQTPTTTTPSILASRS
AYSSPQLIPRGCSSPQPSQPLRPSSATDRDPTGGFRPVVIDGSNVAMSHGNKQVFSCRGL
LLAVRWFLERGLRDITVFVPLWRKEQPSPEAPMTDQHILHELEKRTILVYTPSRCVNGKR
VVCYDDRYIVKLAYESDGIVVSNDNYRDLQIERPEWKTFIEKRLLMYSFANDKFMPPDDP
LGRNGPTIDNFLMKKQWTPENKQQHCPYGKKCTYGVKCKFYHPERSNQSQLSVADELRAK
SKPTAQTDRERSFLPSGPSPALIQEVSQEAHTYTSPYELDLTTTHLYKYLSTPPPLIKEE
HSHSHRASPSDQFTSQRKTGSPVLHHRSSLRLCPSPDTDEAFSSLEASLSRLYVQDQTNN
TKGPVVSYTYSSGVANCSQHSGDFYPSSTSSSHSHASNQQRLSLGGPSSAWDAPQKLPQC
GCDDSQSFECSPCMYRHQHLQSQLGECSYAVHSNHIHFTEQQYFQSPPPQRQSNSLPEHS
PAQGLSGERVGMTRSNGGKAPESEQRRSVKNQLSTLFPHSMVDYVMSVYPHTLNMSELVP
LIQRFRISHIPF
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggaccagcagcatggaaaagtggagcgcttcctcaagctgggctactcccacagtgac
attgtgcgcgtgttggagagcctgcgccatgacgcccagaccaacgacatactggaggag
ctgatcaagacctgccagacccccactaccaccaccccatccatactagccagccgctca
gcctactccagcccacagctgatcccccgaggctgcagctctccccagcccagccagccc
ctgcggcccagctcagctacagacagggatcccactgggggattcagaccagtggtcatt
gatgggagcaatgtggccatgagccatggcaacaagcaagtgttttcatgccgggggctg
ctgctggcagtcaggtggtttctggagaggggtcttcgtgacatcactgtgttcgtgcct
ctgtggaggaaggagcagcccagtcccgaggcccccatgacagatcagcacatcctccat
gagctggagaagaggacgatcctggtgtacaccccgtcacgctgcgtcaacgggaagaga
gtggtgtgttacgacgaccgctacatcgtcaagctggcctacgagtccgacggcatcgtt
gtgtccaatgacaactacagagacctgcagatagagaggccagagtggaagacgttcata
gagaaaaggctgttgatgtacagcttcgccaatgacaagttcatgcctccagatgatcct
ctgggaaggaatggcccaacgattgacaactttctgatgaaaaagcagtggaccccagaa
aacaagcagcagcattgcccgtatggaaagaagtgtacttacggagtgaagtgcaagttc
taccacccagagcgctccaaccaatcacagctgtctgtggcagatgagctgagagccaag
agcaaacctactgctcaaacagacagggaacggtcatttctcccctcaggccccagccct
gctctgatccaggaagtcagccaggaggcccacacttacacatccccttatgagctggat
ctaactacaactcatctatacaaatatctatccacaccgcctccccttataaaagaagag
cattcccattcccatagggcttcgcctagcgatcagttcaccagccagagaaaaacaggc
agcccagttctacaccacaggtccagcctccgcctctgccccagcccagacactgacgag
gccttcagctccctggaagcctccctgtccagactctatgtccaggaccagaccaacaac
accaagggcccagtggtgtcctacacctacagcagtggggtggccaactgcagccagcac
agtggggacttctacccttccagcacttccagtagccacagccacgccagcaaccaacag
aggctcagcctgggtggaccctcctcagcctgggatgccccgcaaaaactgccacagtgt
ggctgtgacgactcacaaagctttgagtgcagcccgtgcatgtacagacaccaacatctc
cagtcacagctaggagagtgctcctatgctgttcacagtaaccatatccatttcacagag
cagcagtacttccagagtcctcccccacaaaggcagagtaacagcctcccagaacacagc
ccggcacagggcctctctggcgagagagtggggatgaccaggtccaatggaggtaaagct
ccagagagtgagcagaggaggagtgtgaagaaccagctcagcaccctcttcccccacagc
atggtagactatgtgatgagtgtgtacccacacaccctcaatatgtcagagctggtgcct
ctgattcagaggttccgaatcagccacattcctttctaa

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