Oncorhynchus mykiss (rainbow trout): 110522162
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Entry
110522162 CDS
T07259
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110522162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110522162
03036 Chromosome and associated proteins [BR:
omy03036
]
110522162
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110522162
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110522162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD_LRWD1
EIF3I
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
110522162
NCBI-ProteinID:
XP_021455988
Ensembl:
ENSOMYG00000013098
UniProt:
A0A8C7PX30
LinkDB
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Position
4:complement(14985835..14992187)
Genome browser
AA seq
372 aa
AA seq
DB search
MEGINAKYVSKKISKTRWRPVSSSSLQQPDIFATGSWDNEDNSISIWSIGENGVSSMDDE
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTIFRHHHNSQTLSVSKLWERAHH
YPCNNAPCTGVVCNSPEIVTVGEDGRIMLFRADQEGVLRTIEKADSSAIHAVTFLRTTEI
LTVNSIGQLKLWDFRQPGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPISLMEAHTSEMWEVHFHPSNPGHLFSCSEDGSLLHWETSSNTDTPSFLQGGRN
TSIISRSAIAPAGGNQSLINAWLTGDSSKGHLETTHMLPSQMLSVNSLDVLGQCLVCGTD
GEAIYVNRHVPI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatcaatgctaagtacgtgtcaaagaaaatcagcaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggacaacgag
gacaacagcatttcaatttggtccatcggagagaatggggtctccagtatggacgatgaa
tttgagggagaccctcaattattatgcgaatacaaacataatggggatgttctggacctt
caatttctggatcaagacagaatagtaacagcgtcatcaactggagcggtgactatcttt
cggcatcaccacaacagccagacattgtctgtttctaaactgtgggaaagagcacatcat
tatccctgcaacaacgccccatgtactggagttgtgtgtaacagccctgagattgtcaca
gttggggaagatggaaggatcatgctcttcagagcggaccaggaaggagtgctgcgcacc
atagaaaaggctgacagtagcgcaatccatgctgtgactttcctgaggactacagagatc
cttaccgtcaattctattggccagctcaaactatgggacttcaggcaaccaggcaatgaa
ccatcgcagattctttcattaactggagacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggac
gtgagacaaggcaacatgcccatttcacttatggaggcacacacttctgaaatgtgggag
gtccattttcatccatcaaacccaggccacctgttctcatgctcagaggatggatcactg
ttgcattgggagacttcttcaaatacagacacaccatccttcttacaaggtggacggaac
acaagcataatttctcgcagcgcaatagccccagcaggtgggaaccagtccctcatcaat
gcctggctgactggggactctagtaagggacaccttgagaccactcacatgctgcctagc
caaatgctgtctgtgaacagtctggatgtactgggacaatgcttggtgtgtggaacggac
ggagaggctatttatgtcaacagacatgtcccaatttaa
DBGET
integrated database retrieval system