KEGG   Oncorhynchus mykiss (rainbow trout): 110522162
Entry
110522162         CDS       T07259                                 
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110522162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110522162
   03036 Chromosome and associated proteins [BR:omy03036]
    110522162
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110522162
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110522162
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD_LRWD1 EIF3I Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_MABP1-WDR62_1st KNTC1_N
Other DBs
NCBI-GeneID: 110522162
NCBI-ProteinID: XP_021455988
Ensembl: ENSOMYG00000013098
UniProt: A0A8C7PX30
LinkDB
Position
4:complement(14985835..14992187)
AA seq 372 aa
MEGINAKYVSKKISKTRWRPVSSSSLQQPDIFATGSWDNEDNSISIWSIGENGVSSMDDE
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTIFRHHHNSQTLSVSKLWERAHH
YPCNNAPCTGVVCNSPEIVTVGEDGRIMLFRADQEGVLRTIEKADSSAIHAVTFLRTTEI
LTVNSIGQLKLWDFRQPGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPISLMEAHTSEMWEVHFHPSNPGHLFSCSEDGSLLHWETSSNTDTPSFLQGGRN
TSIISRSAIAPAGGNQSLINAWLTGDSSKGHLETTHMLPSQMLSVNSLDVLGQCLVCGTD
GEAIYVNRHVPI
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggagggaatcaatgctaagtacgtgtcaaagaaaatcagcaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatatttgctactgggtcttgggacaacgag
gacaacagcatttcaatttggtccatcggagagaatggggtctccagtatggacgatgaa
tttgagggagaccctcaattattatgcgaatacaaacataatggggatgttctggacctt
caatttctggatcaagacagaatagtaacagcgtcatcaactggagcggtgactatcttt
cggcatcaccacaacagccagacattgtctgtttctaaactgtgggaaagagcacatcat
tatccctgcaacaacgccccatgtactggagttgtgtgtaacagccctgagattgtcaca
gttggggaagatggaaggatcatgctcttcagagcggaccaggaaggagtgctgcgcacc
atagaaaaggctgacagtagcgcaatccatgctgtgactttcctgaggactacagagatc
cttaccgtcaattctattggccagctcaaactatgggacttcaggcaaccaggcaatgaa
ccatcgcagattctttcattaactggagacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggac
gtgagacaaggcaacatgcccatttcacttatggaggcacacacttctgaaatgtgggag
gtccattttcatccatcaaacccaggccacctgttctcatgctcagaggatggatcactg
ttgcattgggagacttcttcaaatacagacacaccatccttcttacaaggtggacggaac
acaagcataatttctcgcagcgcaatagccccagcaggtgggaaccagtccctcatcaat
gcctggctgactggggactctagtaagggacaccttgagaccactcacatgctgcctagc
caaatgctgtctgtgaacagtctggatgtactgggacaatgcttggtgtgtggaacggac
ggagaggctatttatgtcaacagacatgtcccaatttaa

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