Oncorhynchus mykiss (rainbow trout): 110522179
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Entry
110522179 CDS
T07259
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X2
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110522179 (med23)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
110522179 (med23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
DUF1664
BLOC1_2
ATG16
XhlA
HOOK
CLZ
CALCOCO1
DUF7310
Crescentin
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
110522179
NCBI-ProteinID:
XP_021456015
Ensembl:
ENSOMYG00000034536
LinkDB
All DBs
Position
4:complement(15914151..15943850)
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AA seq
1473 aa
AA seq
DB search
MSSTRKKTKSARAGHSKPAPSPDSPPDAANAGPTETLTVEMLQSVIGTLKTDIFGKIDSL
STNLRSEISMVKDELKKSIESITLQNKLDAHGVALSDLERDAADHSTRISELEANVGSLT
TKVAYLDNRCKNMESRMRRNNIRLLGIPEGVEGPRPTEFMAQLLQELLGLEENSLLDRAH
RTLRSRPRDGEPPRPLVIRVPFFHVRNDTLRRSGEASLVVPHGVEQMGVRDLLKALLDKI
QTIPNTVSSAVVQQLLAAREVVEYILDRNACLLPAYFAITEIRKLYPEGMLSHWLLGSLM
SDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPFDKDLFEP
QTGLLRYVLEQPYSRDMVCNMLGLNKQTLNIAQHKQRCPVLEDQLVDLVVYAMERSETEE
QFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQF
ISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDISKPQSTHAFAMTCIWIHLNRKAQND
NSKLQIPIPHSLKLHHEFLQQSLRNKSLGMTDYKIALLCNAYSTNSECFTLPMGVLVETI
YGNGSMRITLPGTNCTASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIAL
APALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHY
RVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE
SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPL
QAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLE
TDKINQIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNI
VTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHT
KHMTYHKKYPEKLYFEGLAEQVNPPMQQQSHYLPIYFGNVCLRFLPVFDIVIHRFLELLP
VSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRA
PGWCLSETYIKCGMNPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPN
PAAHALHVTCVELMALAVPGKDVGNALLSVVLKSQPLVPRENITAWMNAIGLVITALPEP
YWVVLQDRIVSVLGSPCFTTETEWVGYPFALLDFTACHQSYSEMYCSYVLALAHAVWHHS
SIGQLSLIPKFLSEVLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQ
AVDQHSQHLSYMDPICDFLYHIKYMFTGDSVKDQVEKIILTLRPAMKLRLRFITHTSKME
PAAASVPQPSSSVSSPAPQSNPGPSNLPLSGAQ
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacccggaaaaaaacgaagtctgcaagagcaggccacagcaagcccgcgccc
tctcctgattcgccaccggacgctgctaatgccggccccacggaaacactgactgtggag
atgctacaatccgtgataggcaccctcaaaaccgatattttcggcaaaattgactctctc
tctaccaatctcaggtcagagatatcaatggtcaaagacgagcttaaaaaatctattgag
agtataacgttacagaataagctcgacgcacacggagtggctttatcggatttggaacga
gatgctgcagaccacagcactcgcattagcgagctagaggctaacgttggctcactgaca
actaaggtggcatacctcgacaatagatgcaaaaatatggaaagtagaatgcggaggaac
aacattcgtctactgggaataccggagggagtggagggcccaagacccacggagttcatg
gcccagctgcttcaggagcttctcggtctggaggagaactcactgctagaccgggcccac
cgcactctgcgtagccgaccacgggatggagaacccccgcgaccattagtcatcagggtg
cctttctttcacgttcgcaatgacacactgaggagatcgggagaagcatcccttgttgta
ccgcatggtgtggaacaaatgggagttagagatctactgaaggctctgctggataagatt
cagaccatccccaacactgttagctcagctgtggtccagcagctgctagctgcacgagag
gtggtggagtacatcctcgacaggaacgcgtgcctcctgcctgcctactttgccattaca
gagatcagaaaactctatcccgaggggatgttgtcacactggcttctgggcagtctcatg
tcagattttgttgacagttttcgacccactgcaagaattaactccatctgtgggagatgc
agcctccttccagtggtcaacaactctggagctatctgcaactcctggaagctggacccc
accacattacgattccctctcaggggcatgctgcccttcgacaaggacctgtttgaacca
cagacagggctgctgcgatatgtgctggagcagccctactctcgagacatggtctgcaac
atgttagggctcaacaagcagaccttgaacattgctcagcacaagcagcgctgcccggtg
ctcgaggaccagctggtggacctggtggtgtacgccatggagcgctcagagaccgaggag
caatttgacgacggcggcaccagccagctcctgtggcagcacctctccagccagctcatt
ttctttgtgctcttccagttcgccagcttcccacacatggtgctctcgcttcaccagaag
ctggccggtcgaggtctgatcaaaggacgagaccacctcatgtgggtcctcctccagttc
atatctggcagcattcagaagaacgccctggctgactttctccctgtcatgaagctgttc
gatcttctctacccagagaaagagtgcatcccggtgccagacatcagcaagccccagtcg
acacacgccttcgccatgacttgcatctggatccacttgaaccgcaaggctcagaacgac
aactccaagctgcagattcctatcccccactccctcaagctgcaccatgagtttctccag
cagagcctgaggaacaagtccctggggatgacggactataagatcgccttgctgtgtaat
gcctactccactaactcggagtgcttcactctgcccatgggcgtgcttgtggagactatc
tatggcaacggcagcatgcgcatcaccctgcctggcaccaactgtaccgcatcaggctcc
gtcacaccactacccatgaacctcctagactccctcaccgtccacgccaagatgagcctg
atccatagcatcgccactcgggtgatcaagttggcccacgccaagtccagcatcgccctg
gccccagccctggtggagacctacagcagactgctggtctacatggagatagaatctctg
ggcatcaaaggattcatcagccagctcctgcccaacgtgttcaagtcccacgcctggggc
atccttcacactctgctggagatgttcagctaccgtatgcaccacatccagccccactac
cgcgtccagctgctcagccacctgcactcgctagccgccgtgccccagaccaaccagaac
cagctacacctctgtgttgagagcacagcgttaaggttgattacagcgttggggagttcc
gaggttcagcctcagttcacccgcttcctcagtgaccccaaaacggtgctgtcagctgaa
tctgaggagctcaaccgtgcgctcatcctgactctggccagagccacccacgtcacagat
ttcttcacgggctccgactccatccagggtacgtggtgtaaggacatcctgcagaccatc
atgaactttactcctcacaactgggcctctcacaccctgagctgtttccctgctcctctt
caggcgttcttcaagcagaacaacgttccccaggagagccgcttcaacctgaagaagaac
gtggaggaggaatataggaagtggaagagcatgaccaacgagaacgacatcatcacccac
ttctccatgcagggatcgccgcccctcttcctgtgtctgctgtggaagatgctgctggag
actgacaaaatcaaccagatcggcttcagggttctggagaggatcggggcgcgggcgctg
gtggcccatgtcaggacgtttgcagacttcctggtctatgagttctccacgtcggccggt
ggccagcagctcaacaagtgtatcgagatcctcaacgacatggtgtggaagtacaacatt
gtcacgctggacagactcatcctgtgcctggccatgaggagtcacgagggtaacgaggcc
caggtctgctacttcatcattcagctcctcctcctcaagcccaacgacttccgcaaccgc
gtctctgacttcgtgaaggagaacgcccccgagcactggctgcagagcgactggcacacc
aagcacatgacctaccacaagaaatacccagagaagctgtactttgagggattggcggag
caggtgaacccgcccatgcagcagcagtcccactacctgcccatctactttggtaacgtc
tgcctgcgcttcctgcccgtctttgacatcgtcatccaccgcttcctggagctgctgccc
gtctccaagtcactggagaccttactggaccacctgggaggactctacaagttccatgac
cgcccggtgacctacctgtacaacacgctccactactacgagcgtcacctgcgtgaccgc
accaacctgaagaggaagctggtgcacgccatcatgagctctctgaaggacaaccgggcg
ccaggctggtgcctgagtgagacctacatcaagtgtggcatgaacccccgcgaagacaac
gtctggatccccgatgacacctactactgcaagctcatcggacgcctcgtcgacacgatg
gctggcaagtcccccgggccgttcccaaactgtgactggaggttcaacgagttccccaac
ccggccgcccacgctctccacgtcacctgcgtggagctgatggccctggcagtgcccggc
aaggacgtgggcaacgccctgctcagtgtcgtcctcaagagccaaccgctggtgcctcgg
gagaacatcaccgcctggatgaacgccatcggcctggtgatcaccgccttgcctgagcct
tactgggtggtcctgcaggaccgtatcgtgagtgtgctgggcagtccgtgcttcaccaca
gagactgagtgggttggttaccccttcgcgctgctggacttcaccgcctgccaccagtcc
tactctgagatgtactgcagctacgtgttggccctggcccacgccgtgtggcaccactcc
agcatcggacagctctccctcatccccaagttcctgtctgaggtgctgaagcccatagta
aagacagagttccagctcctctatgtgtaccacctagtggggcccttcctccagcgcttc
caacaggagaggacccgctgcatgctggagattggagtggcgttctatgaaatgctacag
gctgtggaccagcacagtcaacacctgtcctacatggatcctatctgtgacttcctctac
cacatcaagtacatgttcaccggggacagcgtcaaagaccaggtggagaaaatcatcctg
accctgcgtccggccatgaagctccgtctgcgtttcatcacccacactagcaagatggag
cctgcagccgccagcgttccccagccctcctcctctgtgtcctcacccgccccacagagc
aaccctggcccctccaacctccccctgtctggggcccagtaa
DBGET
integrated database retrieval system
