Oncorhynchus mykiss (rainbow trout): 110522260
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Entry
110522260 CDS
T07259
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110522260 (gtf3c2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
110522260 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
110522260
NCBI-ProteinID:
XP_036831733
LinkDB
All DBs
Position
4:19812019..19833998
Genome browser
AA seq
1042 aa
AA seq
DB search
MPVTESCTVRLLRLPLTKKSCSVNLSRLSVIKKRCSVRLSRLLVTDNWCSVRLCRLPVAK
RCSVKLSTLPVTQKRCSVRLSRLLMATIAQKLGKQGSESMGLPHGEGTEQQTDPHEKPQA
EAQTNPHEKPQDTNGEAVGVSSEQGQDVPPEELPVPSSTPGNRLQRKRVPNPKYQREPDT
TNLQCPDSTKKPRKKMGLKISVVSNTETDQQEPDKKTPKPKPPKKTPQKKAPQKKPVVSS
IDSDKGLIKQIPAKKTSAKKIQKETPQVNSTPAPAVPELRETPEEPETTPSGRPKRRAAK
AALQYLHTLAKEVYNQPDNGTKNDWESSPVPSPSSTQPQKRTRGKGKKRKAPDFDSDNAA
EDVDFVPENQDTEEESEAEDTQEDLDLEKRHTPLKDLRSRRISRGLSSQVRYHGNSPNGL
SNNMMGPIWMCTKTTKTFRDEHCNEWVFAEWMPSEKDWHCLSDSEAEKYLPQEMMSTAFT
FSREGIREETPLHRMKRFECLPPHPERWDMLFYTGGPVWAMDWCPSPDGAPASQYAAIYC
HRNLDDQHRMNELYTKPGLIQIWDLGQLQYNTSPQSSPRLAYGIAQDKGFVWNLKWCPGG
AWELPTTNRKAPHMPRLGLLAASTSDGHITIYSLPHPDTLMARRKHTAKGGACPTLMICQ
VQGVITLKRGSFKTNHDEKNNQVLSMDWLPVKPHNILAAGFYDGTVALWNLSSKSILQRV
RAPDRSFTLYPYHCFIAHDNATRALSFCHASRDLMVTAGDDRLVKMWDLRRTWEPCQSFK
RFLSTEAAWPLHWAGVFISQESTYATFGQHGLNYFDSGYLGFKPLFLVPRKGTMWSLSIS
DWLNTAVTADSVGDVIMVLIPNLFNNPCYLKRSIDRRFPVFRTEMVQLKEEVEENEGGVG
EKGSGSTSNGTSHHTPQTYRETAQKYYLHYHDMDMRTFKNAQSRSPWKHMQVAEAKGGPC
LDLMPLASLTKVRFNPNLCAQSWVLSGGQAGLVRAHCLRAMNSSHINKMVQESQAQFSTM
FPQDTTDSQGDASAVRHTTEEL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacagagagttgcacagttaggctgttgaggctgcctctcaccaagaagagt
tgctcagtaaacttgtctaggctttctgtgataaagaagaggtgctcagtaaggctgtca
aggcttcttgtgacagataattggtgctccgtaaggttgtgtaggctacctgtggcaaag
aggtgctcagtaaagttatctactctgcctgtgacgcaaaagcgttgctcagtaaggttg
tctaggctgttgatggcaaccattgcccagaagttgggcaaacagggtagcgaatccatg
ggcttaccccatggagaggggacagagcagcagactgatccacacgaaaaacctcaggca
gaggcgcagaccaatccacatgaaaaaccacaggacaccaatggggaggctgtcggtgtt
tcatctgaacaaggccaggatgtgcctccagaagagcttcctgtaccatcttccaccccg
ggaaatcgtctacagagaaaaagagtccctaatccgaaatatcagagagaaccagacacg
accaacctacaatgtcctgactcaacaaaaaagccaaggaaaaagatgggcctgaaaata
tctgtagtctctaacacagaaactgaccagcaggagcctgataaaaagaccccaaaaccg
aaaccccccaaaaagacaccacagaaaaaggcaccacagaaaaagccagtggtctcgagc
atagacagtgacaaggggcttatcaaacagatccctgccaagaagacctctgccaagaag
atacaaaaggaaacaccacaggtcaactccacgcccgcccctgcagtcccggaactgagg
gagaccccagaggagcctgaaaccacccctagtggcagacccaagcggagggcagcaaaa
gctgcattgcagtacctccataccctggccaaggaggtatacaaccaacctgacaatggt
actaagaatgactgggagtctagcccagtccccagccccagctcaacccagccccagaaa
cgaaccagaggcaagggcaagaagaggaaggcccctgattttgacagtgacaacgccgca
gaggatgtggactttgttccagaaaatcaagacaccgaggaggaaagtgaggctgaagat
actcaagaagacttagacttggagaagaggcacacaccactgaaagaccttagatccaga
cgcatttccagaggtctttcaagtcaagttcgataccatggtaattcccccaatggactg
tccaacaacatgatgggacccatctggatgtgcaccaaaaccaccaagaccttccgtgat
gaacactgtaacgaatgggtctttgctgagtggatgccttcagagaaggattggcattgc
ttgtcggacagtgaggctgagaagtatctaccgcaggagatgatgtcaacagccttcacc
ttctcaagagagggcatcagggaggagactcctctgcacagaatgaagaggtttgagtgc
ctgccaccccaccctgagcgctgggacatgctattctatacgggcgggccggtgtgggcc
atggactggtgcccctcccccgatggcgcccctgccagccagtacgctgccatctactgc
cacaggaacctggacgaccaacacaggatgaacgagttgtacaccaaacctggactcatc
cagatttgggacctgggacaactccagtacaacaccagtccccagtcctctccacggctg
gcctatggtattgcccaggataaaggctttgtgtggaacctgaagtggtgtccaggagga
gcctgggagctgcccaccactaacaggaaggcccctcatatgcccagactgggtctcctg
gctgcctccacatcagatggtcacatcactatctacagcctgcctcaccccgacacacta
atggcccgcaggaaacacaccgctaaaggtggagcctgcccaacactgatgatctgccag
gtacagggtgtgatcactctgaagcggggctccttcaagaccaaccacgatgaaaagaat
aaccaggttctctccatggactggctgcctgtcaaacctcacaatatcctggctgctggc
ttctatgatggtacggtggccctgtggaacctgtccagtaagtctattctgcagcgggtg
cgtgctccagaccgctccttcaccctctacccctaccactgcttcatcgcccacgacaac
gccacccgcgccctcagtttctgccacgcatccagagacctcatggtgacggcgggtgat
gacaggctggtgaagatgtgggacctgaggaggacctgggagccctgccagtccttcaag
cgcttcctctccaccgaggcggcctggcccctgcactgggctggagtcttcatctctcag
gagagcacctacgccacgtttggccaacatggactcaattactttgactcagggtatctg
ggcttcaagccactctttctggtgccacggaaagggaccatgtggagcctgtcgatctct
gattggctgaacacagctgtgacggcggactcggtgggagacgtgatcatggtcctaata
cccaacctgttcaacaacccctgctacctcaaacgatccatcgatcgcagattcccggtg
ttcagaaccgaaatggtccaattgaaagaagaagttgaggagaatgagggaggagttgga
gagaaaggaagtggttccaccagtaacggaacatcccatcatacacctcagacctacaga
gagacagcccagaagtactacctccactaccacgacatggacatgagaacgtttaagaat
gcccagagccgatctccgtggaagcacatgcaggttgcagaggccaaagggggaccgtgt
ctggacctaatgcctttggcttcactaaccaaggtccgtttcaaccccaacctgtgtgcc
cagagctgggtgttgtctgggggccaggcgggcctggtaagagcccactgcctcagggcc
atgaacagctctcacattaacaagatggtgcaggagagccaggcccagttcagcaccatg
ttcccccaggacacgacagacagccagggggacgccagtgccgtcagacacaccacagaa
gagctgtag
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