Oncorhynchus mykiss (rainbow trout): 110522285
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Entry
110522285 CDS
T07259
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110522285
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Patched domain-containing proteins
110522285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Cas9_REC
Motif
Other DBs
NCBI-GeneID:
110522285
NCBI-ProteinID:
XP_021456225
Ensembl:
ENSOMYG00000014749
UniProt:
A0A8C7Q3Z1
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All DBs
Position
4:20923517..20957715
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AA seq
920 aa
AA seq
DB search
MCFIGRNGASASWIWRRMLRQMIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEILVAPTHSFAKVERSLANSLFPIDQSKNKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKKVLDLSVNYKGFNYTFAHLCVLSHQDKRCILDDIITIFEDIRLA
ILSNYTFSKVPVSYPNTTLKDGRVSFIGHQLGGVAFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDVIAEKWENAFCALITRLSTLSEDLHIQSLTSFSLWRDFHQTGVLAKGEVLVSMV
LLLLAATISSSMRDCLRGKPFLGLLGVLTIAIANVTAAGIFFISDGKFNSTLLGIPFFSM
GHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTNIE
SVKIFCQSMCVAVLVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPTWF
KTMMSDGHDHVTHHEVLPYHNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMGC
LQISDGSNIVNLLASNTPSVSYATTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLTTLS
HGFNKISWMDNYFQYLKVVNVSASTKSDFITILQGSFLRSPEYQHFMEDIILSKTDGDEM
EIIASRMYLVARTTEKTREEVVELLERLRPLSLINNIKFIVFNPTFVFMDRYSSSVVSPI
LTSAFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVHMDSISILCLIYT
LNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNACCFIIGMLPLVFVPSNLT
YTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREMMERERVR
EREEIECIEVRENPDHVTNV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaacggggcatctgcaagctggatctggaggaggatgctgcgg
caaatgatacacagagggctcaaagcttctttctactggctgggcttatttgttagtagg
catcctgtttttttcctcaccgttcccgcagtcttaaccatcattttcggatctacagtc
ctgagcagattcaagcccgaaacggacctcgagatactggttgccccgacccacagcttt
gctaaagtagagcggagtcttgcgaacagccttttccccatcgaccagtctaaaaacaag
ctgtattccgacctgcacacccccggcagatatggcagactgattctactggccaagtct
gggggaaatatattggagctagccgaccaggtcctgcaggttcacaaaaaggtgttggat
ttgagtgttaattacaagggattcaattacactttcgctcatctctgtgtcctgagccat
caggataagcgatgcatcttggatgatataattacgatattcgaagatatccgtttagct
attctgtcgaattatactttctcgaaggtgcccgtgagctatccaaatacaaccttaaag
gacggtcgtgtctctttcatcggccaccagctgggtggagtggccttctcgcccaacagc
cgagaccagcaggtgaagtttgcccgtgccgtccagatcacctactacctccgcaaccat
ggccccgtggttcaggacgtcatcgcagagaagtgggagaacgccttctgcgccctcatc
acgcgcctgtccacgctcagcgaggacctgcacatccagtctctcacctccttcagcctg
tggagggacttccaccagacgggagtgctggctaaaggggaggtgttggtcagcatggtg
ctcctcctgctggcagccaccatctccagctccatgagggactgcctgagggggaagccc
ttcctgggtctactgggtgtgctcacaatagccatcgccaacgtgactgcagctggcatc
ttcttcatctccgacgggaagtttaactccacgctgctggggatccccttcttttccatg
ggtcatggaaccaaaggagtgtttgagctcctggcgggctggagaagaactcgagagagc
cttcccttcaaggagcgcgtggcagacgccttcgccgacgtgatggtgtgctataccatg
accagttccctctacatcatcacctttggcatgggtgccagccccttcaccaacatcgag
tcggtgaagatcttctgccagagcatgtgcgtagccgtccttgtcaactacttctacgtg
ttctccttctatggttcctgcttggtgttcgctggtcagctggagcagaaccgctaccac
agtgtgttctgctgtaagataccctcagtggagtacctggaccgccagcccacctggttc
aagaccatgatgagcgacggccatgaccacgtcactcaccacgaggtcttgccctaccac
aaccacttcatccagcacttcctgagggagcactacacagagtggatcaccaacacctac
gtcaagccctttgtggtcatcctctatctgatctacgcctccttctccttcatgggatgt
ttacaaatcagtgatggatccaacatcgtcaacctcctagccagcaacacgcccagtgtg
tcctacgccacgacccagcagaagtacttcagtaactacagccctgtgatcggcttctac
atctatgagcccatcgagtactggaactccacggtgcaggagcacctcacaacactgagc
cacggcttcaacaagatctcctggatggataactactttcagtatctgaaggtggtgaat
gtgagcgcctcgaccaaaagtgatttcatcaccatcctgcagggctccttcctgcgcagc
ccggagtatcagcacttcatggaggacatcattctgtccaagacagatggagatgaaatg
gagatcatcgcgtccaggatgtacctggtggcacggaccacggagaagacacgggaggag
gtggtggaactgctggagaggctccgcccactatcgctcatcaacaacatcaagttcatt
gtcttcaaccccaccttcgtcttcatggaccgttacagctcctccgtagtgtcgcccatc
ctcacctcagctttcagtgtgctcaccatcctcatcctcaccttcttcctggtcatcaac
cctctggggaacttctggttgatcctgaccgtcacctccgtagagctgggggtcctgggc
ctcatgaccctctggaatgtacacatggacagcatctctatcctgtgccttatttacact
ctcaactttgccatggatcactgtgcaccccacctgtataccttcgtactggccacggag
cacaccaggacccagtgcattaagatctcgctggaggagcacggggcggccattttgcaa
aatgcctgctgtttcatcattgggatgttgcccttggtgtttgtgccttccaacctgacc
tacacactgttcaagtgctccctcctcaccgcaggctgcacagtgctgcactgtttcgtt
atcctgcctgtgtttctaacgtttttccccccgtccaaaaaaaggcacaagaagaagaaa
cgggccaaacggaaagagagagagagggagcgggagatgatggagagggagagagtgagg
gaaagggaggagatagagtgcattgaagtcagggagaaccctgatcatgtgactaacgtc
tga
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