Oncorhynchus mykiss (rainbow trout): 110522368
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Entry
110522368 CDS
T07259
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110522368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110522368
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
NGL family
110522368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
110522368
NCBI-ProteinID:
XP_021456392
Ensembl:
ENSOMYG00000036128
UniProt:
A0A8C7T8S0
LinkDB
All DBs
Position
1:38044085..38191664
Genome browser
AA seq
645 aa
AA seq
DB search
MLNKMTSSRQQQTMRGPRWNRALSDHLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKVGPTP
SAGSWETVSSTSTTTTTARTPLSTRATEKTFTIPVTDLNDSSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPTMEGHLNLPPLEH
EHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccatttgtttgtgctgcttctagccctccagctcctggcggtggca
ggcctggtgcgcgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacacggcgtgggctccgtgaggtccccgacggcatatccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacatccgaaacattgagattggggcc
ttcaacggcctggctagtctcaacactctggagctgtttgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaagctcaaggagttgtggctgaggaacaacccc
atcgagagcattccctcgtatgcgttcaacagggtgccctcgctacggcggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccatctgcagaagctgtggatgatgcatgcccagatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagcttaacctggcccacaacaacctc
accctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgtgcccgctgcagttccccagctagccacaagggacgc
tacataggtgagctggaccaaaactatttccactgttacgcacctgttattgtggagcca
ccagcggacctgaacgtgacagagggtatggctgcagagctgaagtgcagggccagctct
ctgacctcagtcagttggattacacccaatggctccatcatgacccacggtgcatacaag
atccgcatttctgtgctcaacgacggcacgctcaacttcaccaatgtcaccatgcaagac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtgtcttccacagagaacgtcctcagctactttaccacagtaacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaaggtgggccccaccccc
tccgctggatcctgggagactgtgtcgtccacctccaccaccaccacaacggcccggacg
cccctctccacccgggccacagagaagacctttaccatccctgtcacagacctgaatgac
agctccatgaccggcctggatgaggtgatgaagaccaccaaaatcatcatcggctgcttc
gtggccatcaccctcatggccgccgttatgctaatcatcttctacaagatgaggaagcag
caccaccagcagaaccaccatgcgccacagcgcaccattgagatcatcaatgtagacgag
gactgtgtgacaggcgggccgaccatggagggccacctgaatctgcccccgctggagcat
gagcacctgaaccactacaacacctataagtctgcgtacaaccacgtctccactatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagttcgaaagacaatgta
caagagactcagatctaa
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