Oncorhynchus mykiss (rainbow trout): 110522402
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Entry
110522402 CDS
T07259
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110522402 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Tubby family proteins
110522402 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
110522402
NCBI-ProteinID:
XP_036831879
Ensembl:
ENSOMYG00000021592
LinkDB
All DBs
Position
4:24082855..24138549
Genome browser
AA seq
1827 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
QVQRLKPLLTVSFTSGDISLMNNYDDLSPTLIHTGLKDVVVQWCSQGDLLAVAGMERAVL
PPDSSCLPPTRNAVVKFYNVCGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPVLYVVR
VEHRVASLQLLCQQGIAGALREEKDVAKLTMPSRLCSYVTTAFTPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKADEVYGNSLISSMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRDLVCP
FTNRINIDPRKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVT
SNIWGTKFKIVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSP
NVFSEDEDDLPVTGASGVADDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQ
LDVLSNPTAISSVASAGAGGSSDQGQDTILTAQYTVPSRYSSPGQVIFGGLEMSRLLVGP
PPSHHHQQQQQSHPQSHQQPLQQHHQQQQIQHQQQQQLQHHHQQLQQQQQRLAQQHHQQQ
LAQQHQQQIQQQQMLQHQQMQQQQIQQQQQHIQQQIQHMQQQQQHIQQQHQQQLQHQQQL
QQQLQQQQHTQQLQQQQQQIQQHMQQQQHQQHHQMQQQQQIQQHHQMQQQLQISVPSQVS
GAAVHQLQQGALQIPVPHPAGGLVAERRVSVEHEHLLKIKPTRSAPQLAEGDTVVFSAPL
ELSKMNPPPPYPGTVAAAAASASAAAANAASGQAGGSNGTPPPVDLCLKKGEFSLYPPGQ
QAAQYPTPLGYERITTFDSRGNVEEVCRPRTRLVCNQNIYTLQVPGSSATLRVTSSSSST
DGKKIQLPYASATLNRLTVPRYSIPSGDPPPYPDTANQNTSGGRSTGQRLDSSLIHATLR
RNSREAALKVSQMLDPQRTLPTKAKSQNAALASSYQQRVPKALYTCSQCSSNSSGLSSAA
SSAPSGTANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSASPLVSQSSYNLDGSGNGGGGG
NRDRADYVNSAFTEDEALSQSLRHLALGGADVSGLTVKRPPPYQWDPATTEEVWVPQERT
GTLSSAGHTGPHKPPPLILSPAQHLDISRLPFILSPKSPTSPSAASFQAAAAAAGYQISL
QYAPGTTYSGPQQQPMPGSPRLCSPKEMVAPVPFNQQDATLVLPPGYPANLSNLACCPLP
PMYPGGSSCAGLPIPPIALHTPWGTYNPCPPMPSPSGTLPPMPPKHSQMMVDKSVLSPPP
PPPPPPPPPPAELQLQGHGGSPEAMAMEAGEGFQEVLSLNESPVPSSAEKFGKKNRKRAD
GRAEEANAPAIAEGGKSKKEGRALGDFNSLISSPRLGSREKKKPKGQKEQQLKAKKLNKA
PTNSEFQDSSESEPELFISGDELLNQCQSGKKGWKSKRSLRAASELEEIKCRKANEKEDR
GLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNA
YILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagcatggccccgtcctgtgcagcgactccaacatactctgcctg
tcatggaagggccgggtacccaagagcgagaaggagaagccggtgtgccggcggcgctac
tatgaggagggctggcttgccacagggaatgggagaggggttgtcggggtaacgttcaca
tccagccactgcagaagggatcggactaccccacagaggatcaacttcaacctgagagga
cacaatagtgaggtggtcctggtgcgatggaacgagccctttcagaaactggccacttgt
gacacagacggagggatctttgtgtggatccagtacgagggccgctggtctgtggagctg
gtcaacgatcgcggggctcaggtgagtgacttcacctggtctcatgacggtacccaggct
ctcatctcttaccgtgatggctttgtcctggtgggctcggtcagcggccagagacactgg
tcatcagagatcaacctggagagccagatcacctgtggtatctggacccccgatgaccag
caggtattgtttggtactgcggacggccaggtgatcgtgatggactgccacgggcgcatg
ctggcccacatcctgctgcacgagtcagacggcattgtcagcatgtcatggaactacccc
agcttcctggtggaggacagcagcgagagcgacacagactctgacgactacacaccacca
caagtccaacgtttgaagcctctgctgacggtcagcttcacctctggagacatcagcctg
atgaacaactatgatgacctctctcccactcttatccacactggcctaaaagatgtggta
gtccagtggtgttctcagggggatctcctggccgtggctgggatggagagagctgtcttg
ccccccgactcctcctgtctacctcccaccagaaacgccgtcgtcaagttctacaacgtc
tgcggagaacacatctacacactggacacgcctgcacaacgtcccatcaccacgctgtgc
tggggtcaccgggactctcgtctgttcttggcttgtggcccggtactctacgtggtgcgg
gtggagcaccgggtggccagcctgcagctgctgtgccagcagggcattgccggggcgctc
cgggaggagaaggacgtggcaaagctcaccatgccctctcgtctctgttcttacgtcacc
acagccttcacacccaccatcaagccccccattccagaccccaacaatatgcgtgacttt
gtgagttacccgacggcggggaacgagcggctgcactgcaccatgaagcggacggaggac
aaccctgaggtgggcgggccctgctacaccctctacctggagtacctggggggcttggtg
cccatcctcaagggccgacgcatcagcaagctccgtcccgagttcgtgatcatggacccc
aagacggacggcaaagcagatgaggtgtatgggaacagtctgatctcgtcgatgatagac
agctgtaactgttcagactccagtgatatagagctgagtgacgactgggtcggcaagaaa
tccccaaagatatccagaggcagcaagtctcccaaacttcccagagacttagtctgtccc
tttaccaacagaatcaatattgaccccagaaagtcccccaaactgtcccgcgctacccag
gagatctcgcggtcgccacggttacccatccggaagccgtccattgggtccccaagtctc
acccgcagagagttccccttagatgacatcacacagcataactaccttgctcaggtcaca
tccaacatttggggaacaaagtttaagattgtgggacttgccaccttcttgccaaccaat
cttggtgcagtgatctacaagacaagtctgctccacctgcagcccagacagatgaccatc
tacctgccggaggtgcgtaagatctctatggactacatcaacctgcctgtgttcagcccc
aacgtcttcagtgaggatgaggatgacctgccagtcaccggggcctcgggcgtggccgac
gacaaccctccctgcactgtcaacatccccattgcccccatccacagtcccgcccaggcc
atgtcccccacccagagcatcggcctggtccagtccctcctagccaatcagaacgtccag
ctggacgtcctatccaatcccacggccatctcctccgtggcttctgcaggggcagggggg
tcgtctgaccagggccaggacaccatcctgaccgcccagtacacggttcccagcaggtac
tccagtcctggacaggtcatctttggagggctggagatgagccggcttctggttgggcct
cctccctctcatcaccaccaacaacaacaacaaagccatccacagagccatcaacaacca
ctgcagcaacatcatcagcaacaacaaattcagcatcaacaacaacagcagcttcagcat
caccatcaacagctacaacaacagcaacaacgactagcgcagcaacatcaccaacagcaa
ctggcacagcaacatcaacagcagatccagcagcagcagatgctgcaacaccaacagatg
cagcagcagcagatccagcagcagcagcaacacattcaacagcagatccagcacatgcag
caacagcagcagcacatccaacaacaacaccaacaacagctccagcaccaacaacagctc
cagcagcagttacagcagcagcaacacacacagcagctgcagcaacagcagcaacagata
cagcagcatatgcaacaacaacagcatcagcagcaccatcagatgcagcaacagcagcag
atacaacagcaccatcagatgcagcaacagctccagatatctgtcccctctcaggtgtca
ggtgcagcagtgcaccagctccaacagggtgcgctccagatccctgtcccccaccctgca
ggggggctggtggctgagagaagggtcagtgtggaacatgagcacctgctgaagattaaa
cccacccgctctgccccccagctggctgagggggacacggtggtgttcagcgcccctctg
gagctcagcaagatgaaccccccgcccccctaccctgggacggtggccgcagctgcagcc
tctgcctctgctgcagcagccaacgccgcctctggacaggctgggggcagtaacggcacc
ccgccgccagtggacctgtgcctgaagaagggcgagttctccctgtatcctcctggccag
caggcggcacagtacccaacgccgctaggctacgagcggataactacgtttgacagcagg
ggtaacgtggaagaggtgtgccggcctcgaacgcggcttgtctgcaaccagaacatttac
acgctccaggtcccgggaagctcagcaaccctccgggttacctcctcttcttcctcaaca
gacgggaagaagattcagctgccctacgcctcggcaaccctcaacaggctcaccgttccc
cgctattccatacccagtggagatccgcccccctaccccgacacagccaatcagaacacc
tcaggggggaggagcaccggacagaggctggacagcagtctgatccatgccacactcagg
cggaacagccgagaggccgctctcaaagtttcccagatgctggaccctcagaggaccctg
cccactaaagccaaatcccaaaatgctgcactggcgtcttcctaccaacaaagggtgccc
aaagccctgtacacctgcagtcagtgcagtagtaacagcagtgggcttagtagtgcagcc
agcagtgctcccagtgggactgcgaatggaatcgcaggaggtacaatcattagacaggat
tttcctccagggaatggagctcctcacagcacggtgatcgtccactccaacagcgcttct
cccctagtctctcaatcctcatacaacctggatggctctgggaatggaggaggaggtggg
aacagagacagggctgattatgtgaactcagccttcacagaggatgaagcactgagtcag
tcattgaggcatctggcactagggggtgcagatgtgtctggactgacagtcaagaggcca
ccgccataccagtgggacccagccaccactgaggaggtgtgggtgccccaggaacggacc
ggtactctgagctctgctggccacaccggaccccacaaaccacccccgctaatcctcagc
ccagcccagcacctcgacatctcccggctgcctttcatcctctcccccaagtcccccacc
agccccagtgctgcctctttccaggctgccgctgcagctgcaggttaccagatctccctt
cagtacgctcctggcacaacctatagtgggccccagcagcagcccatgccaggctctccc
cgtctctgctcccctaaggagatggtggccccggtccctttcaaccagcaggatgccacc
ctggtcctcccacctggctatccagccaacctgtctaacctggcctgctgccccctccct
ccaatgtacccggggggaagctcctgtgccgggctccccatcccccccattgccctacac
accccctggggcacctacaacccctgcccccccatgcccagcccctcggggacactgccc
cccatgccccccaagcactctcagatgatggtggacaagtcagtcctctctccccctcct
cccccaccgcctccccctccaccgcccccagcagagctgcagctgcagggtcatggtggc
tcaccagaggccatggcaatggaggccggagagggcttccaggaggtcctctccctcaac
gagagccccgtgcccagcagtgctgagaagtttggcaagaagaaccgcaagcgggcagat
ggcagggctgaggaggccaatgcaccggccatcgccgagggaggcaaatccaagaaggag
ggccgggccctgggtgacttcaactctctgatctccagcccgcggctgggcagcagggaa
aagaagaagcccaaaggccagaaggagcagcagctgaaggctaagaagctgaacaaggct
cccacaaacagcgaatttcaggacagctcagagagtgaacctgagctcttcatcagcggg
gatgagctgctcaatcagtgccagagcggcaagaagggctggaagagcaagaggagccta
cgggcggccagcgagctagaggagatcaagtgccgcaaggccaatgagaaggaggaccgc
gggttgggaagccagggctttgtttatgtgatggccaacaagcagccactgtggaatgag
gccactcaggtctaccagctggactttgggggacgtgtcacacaggagtcggccaagaac
ttccagatcgaactggaggggagacaggtgatgcagtttggcaggattgacggcaacgcc
tacatcctggacttccagtacccgttctctgctgttcaagccttcgcagtggctcttgct
aatgttactcaacgcctcaaatga
DBGET
integrated database retrieval system
