Oncorhynchus mykiss (rainbow trout): 110522407
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Entry
110522407 CDS
T07259
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110522407
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110522407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
110522407
NCBI-ProteinID:
XP_021456458
LinkDB
All DBs
Position
4:24052548..24060425
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AA seq
976 aa
AA seq
DB search
MGVHDLWSILGPVRESVPLYSLTGKTLAVDLSLWVCEAQHVQAMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKLKAETMSKRTDMRFGGFDKSAPKKQTTKTTNRGRFNAVLR
ECAEMLDCLGVPWVTAAGEAEAMCAFLDAQGLVDGCITNDGDAFLYGAQTVYRNFNMNTK
DPQVDCYRTSRVETELQLARETLVGLAILLGCDYIPKGIPGVGKEQALKLIQTLKGQTLL
QRFSQWREEGVVAPEWVLKKVPHCHLCCHPGSAKAHERSGCVLCDSKHFCEPQDYDYQCP
CHWHCCEQTRQASSTDASIRKKTLASDKFPFTEIINEFLVDKDKPVHNFKWRKPNMLLMQ
NFAYNKMLWPKHYTSEKVLVLMTYTELMNRKHGRATSSLIKPLRIWKPRVRNAIASFEII
WSKPDHYVFSEDHPEDSQDEVRTVEEEALFRLAYPHVVELYLREKAENKTKKKKPKGKKD
KPLDHCDVSDLLAKMSLHSSIADNNTQQPSAVAAALTITTSNNSVWVLEGPESESPKRHL
DPGKDHPRLEVSLGAQIQEVMSPPSFTSSGKIPEAAASSPSVSVVMDALHLSDIDWESQS
FTSSPPPQAVGARTATDPKSLQTTNDSVEERITKLGPSTDLRAAEAVPGPCYAECSLRDR
VLMRNTCKSVNMADNDDVTIIHVNSQSAAPPDLIDSNNSGPKPMALIPIKSSNASKPSEQ
PLVCGKKATLVDKDQSIALLHKPQPAHHISKPISLNATQTSPVTATQTGPVTATQTQGAK
QHGAGEPKPPQKYRFVKKAISSSSALPQRSHSEPSDTQPGRDDRNMKSHQETKKSVCARV
CSSSEDSDTVNQCRGGGQSRAKVKPKSRHRCQYLTDYSLKPTSKPSTSTKAVWDTVTAQP
LRPRAVSASMGEQPIRGSSVSTIGKCQDVHPIRVDDDIVFIPSPVSPVTMSDGDDSVICS
KSPLPLAERVKLKFLK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgacctgtggtccattctgggaccggttcgggagtcggtgccgttgtac
agcctcaccggaaagaccctggccgtggaccttagcctgtgggtctgcgaggcccagcac
gtccaagcaatgatggggaaagtcaccaaacctcacctccggaatctgtttttcagagtt
tcctctctcacactgatgggggtaaagctagtttttgtcatggagggagaggcccccaaa
ctcaaagcagagaccatgagcaagaggacagacatgagatttggggggttcgacaagtca
gcccctaaaaaacaaactacaaagaccaccaacaggggtcgcttcaatgctgtgctgaga
gagtgtgcagagatgctggactgtctgggtgtcccctgggtgacagcggcaggggaggcc
gaggccatgtgtgcctttctggatgcccagggcctggtggacggctgcatcaccaacgat
ggggacgcttttctctacggagcacagaccgtctacagaaacttcaacatgaacaccaag
gatccacaggtggattgttacaggacttctagggtggagacagagctgcagctagccagg
gagacactcgtgggtctggccatccttctgggctgtgattatattcctaagggtatacca
ggagttgggaaagagcaagctctaaaactcatacagacattgaaagggcaaacactttta
caaagattcagccagtggagggaggagggcgtggttgcgccagagtgggtcctaaagaag
gtccctcactgccatttgtgttgccatcctgggtcagccaaggctcacgagcgcagtggc
tgtgtgttgtgtgacagcaagcacttctgtgagcctcaagactatgactaccagtgtcct
tgtcactggcactgctgtgagcagacacgacaggcctcttcaacagatgccagcatcagg
aagaaaacactggcaagtgataaattcccttttacagagatcataaatgaatttctggta
gacaaagacaagcctgtccacaatttcaaatggaggaaaccgaacatgctattaatgcag
aactttgcgtacaataagatgttgtggcctaaacactataccagtgagaaggttctggtc
ctgatgacgtacactgagctgatgaacagaaaacatggaagagcgacgtcgtctctgata
aaacctctacgtatatggaagccaagagtaaggaatgcaatcgccagctttgaaatcatc
tggagtaagccagatcactatgtgttttctgaggaccaccctgaggacagtcaggacgag
gtgaggacggtggaggaagaggctctgttccgcctggcctacccacatgtggtggagctg
tacctcagggagaaggctgagaacaagaccaagaagaagaaaccaaagggtaagaaagac
aagcctttggatcactgtgatgtttctgacctcctggccaagatgtctttgcacagttcc
attgctgacaacaacacccaacaaccctctgccgtggcagcagcactgaccattacaaca
agtaacaactcagtgtgggtcctggagggtccagagtcagagtctccaaaaaggcatctg
gatcctggtaaagaccatccccgcttagaagtaagtcttggagctcagatacaggaagtg
atgtcacctccgtctttcacttcctctgggaagattccagaagcagcggcctcctctccg
tctgtttccgtggtgatggatgctcttcacctgagtgacatcgactgggagtctcagtca
ttcacgtcctccccgcccccacaggctgttggcgctcgcactgccactgaccccaagtca
ctccaaaccacaaatgatagtgtcgaagaaaggatcacaaaactgggcccctctactgat
ctcagagcagcagaggccgtaccagggccatgttatgcagagtgttcgctgagggacagg
gtcctaatgagaaacacatgcaagtctgtgaacatggcggacaatgatgacgtcaccatc
atacacgtaaactcccagtcagcagcaccccctgatttaattgattctaacaacagtggc
cccaagccaatggcactgatacccattaaaagcagcaatgcttccaagccatcagaacag
ccgctggtgtgtggcaagaaagccacacttgttgataaggaccagagcattgcattgctc
cataagcctcaacctgctcatcacatctcaaaacctatctcattgaacgcaacacaaaca
agcccagtcacagcaacacaaacaggcccagtaacagcaacacaaacacaaggggctaaa
caacatggtgccggtgaaccaaagcctccacagaagtacagattcgtaaagaaggccata
tcatcttcttccgctctgccacaaaggagccactctgaacctagcgacacacagcctggt
cgggatgacaggaacatgaagtcacatcaagaaaccaagaagagtgtgtgtgccagagtg
tgttcatcgagtgaggacagtgacacagtgaaccagtgtcggggaggagggcagagcagg
gccaaagtcaaacccaaaagcaggcacaggtgccaatacctcacagactactcactgaaa
cccacctccaaacccagcacctctacaaaggcagtctgggacacagtgacagcccagccc
ctcaggcctagagctgtgtctgccagtatgggtgaacaaccaatacgaggcagctctgtg
tctaccatagggaagtgccaggatgttcatccaattagagttgatgatgacattgtgttc
attccaagccccgtttccccagtgactatgtctgatggtgatgactcagtgatttgcagc
aagagcccactgccattggcagagagggtgaagctgaagttcctgaaatga
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