Oncorhynchus mykiss (rainbow trout): 110522444
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Entry
110522444 CDS
T07259
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
110522444
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
110522444
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
110522444
NCBI-ProteinID:
XP_021456510
Ensembl:
ENSOMYG00000030585
LinkDB
All DBs
Position
4:complement(28500354..28522613)
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AA seq
672 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGAWCYQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEDDEEQEQSAVAW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYIIHSMDPDNLELTFDFFEEDMG
EHVVPGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCIPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMKDGSWEGNLSSYFNMNL
FLDIILTCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISEIYPELMDIRCR
TTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCPSSTSKEHN
GSAESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagcctggtgctatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctatcgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagagtgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcactactcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgcttcaggattaagctgacg
ctggaaggtgtagaggaggaggaggatgatgaagagcaggagcagagcgctgtggcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcctgagtgtggttatgccctggaggcctcacagtggacagagtacatcatc
cactccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatgggt
gagcatgtggtgccaggggatgcccacccggggaccgtgggtacggcctgccttctctcc
tcattctttgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagtgccccc
ctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagttagg
gagaacacaattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagagttt
gacgtccatctctccaaggactgcatccccatcgtgtaccacgatctcacctgctgcatc
tccactaagaagaaaggagacaaactctctctggacctgtttgaagttcctgtcaaagac
ctcacatacgaccagcttcagcagctcaagttgggccatgcttctgccttgaaggtgaac
gaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttccttt
tcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgggtt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaacctg
ttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccccatc
ctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgctgtcgc
accacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcccac
actgaggagctccttcagaatctggagcacatccgagaggcccagtctaaaggcctggta
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaacag
ggaattgacggactcatctacgacaggatctgtgacgaccaggtcgagcagcctaacatc
ttcaaagtagaggagcaacacactctgcaggaaacgctcaagagctttgtgtgttcctgc
tacaccatcccctgccaggcggctcctgtctgcccctcctccacctccaaggagcacaac
ggcagtgcagagtctgactcgggcctcagctcctcctga
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