Oncorhynchus mykiss (rainbow trout): 110522529
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Entry
110522529 CDS
T07259
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110522529
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110522529
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
SALM family
110522529
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110522529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
ig
fn3
Ig_2
LRR_9
LRR_5
Ig_VEGFR-1-like_5th
LRRCT
GP79
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
110522529
NCBI-ProteinID:
XP_021456650
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All DBs
Position
4:complement(33750249..33940233)
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AA seq
799 aa
AA seq
DB search
MDHILCCLLVLGTAVLMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFSDLETLRSLHLDNNRLIELGPDDL
RGLVNLQHLILNNNQLGRISDRALEDLAPSLEDLDLSYNNLRSLPWDSVKLMVSLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLKKLPPDPIFARAQDSVMMTTPYAPQLSLGIG
GNPLHCNCEVLWLRRLERDDDQETCASPSNLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQMASLRCEAIGDPTPTIHWMAPDDRVLGNSSRTVVNGNGTLEILITTSKDYGTFTCI
AANVAGESTASVDLSIIQLPHLSNGTGQASQPKSRLSDITGTTRISKGVPKTPPEKVVTV
SEVTAISALVKWTVSKTAPKVKMYQLQYNCSDDEVLIYRMIPASSQAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIVILMVRYKATDHEGGGIGGSGKLTSVSDTHSQTNGGRLGQNGVPLPLPKPKAKVTLQD
EVVEFKCGSLQSTSSSSSSGGSVVGEGSYSPNSTLAIMWRQAAPSKPRANLDHLLGAFNS
LELRGAQGRGDLGEPSSSSSTPVAGGDRPHTDREPLLGRTMDSRLSRLLMLSHDSKPKRS
QSFDMGDCMDTDQQTDQAMASSTSTATTPVCSYPRRISNIWTKRSLSVNGMLLQCDEEGD
MGGSKGTFDSQEWVMESTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgttgatggcccacgca
tgcccaaagtactgtgtgtgccagaacctgtccgagtccctggggaccttgtgtccctcc
aaaggcttgctcttcgtcccactggacatcgaccggcgcactgtggagctccggctgggc
ggaaactacatcctccgcatcacccagcaggactttgccaacatgactgacctggtggac
ctgacgctcagccgcaacaccatcagttacatccagcccttctccttcagcgacctggag
accctgcgctccttacacctggacaacaaccgtctcatagagctgggtcccgatgatctc
cggggcctggtcaacctgcagcacctcatccttaacaacaaccagctgggacgcatctcg
gaccgggccttggaagacctggcaccctccctagaggatctggatctgtcctacaacaac
ctgaggagcctgccctgggactcagtcaagctgatggtctctctccaccagttgagtctt
gaccataacctcctggacttcatccctgaggggacctttactgatctagagagactggct
cgcctggatctcacctccaaccgactgaagaagctgcccccagaccccatcttcgccagg
gcccaggattcagtgatgatgaccactccctatgccccccagctgtcccttggcatcggg
gggaaccccctgcattgtaactgtgaggtgctttggctgcggcggctggagagggacgat
gatcaggagacatgcgcttccccttccaacctgaaggggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccacccctcatcactcagcacacccacaggatgctggtg
ctggagggccagatggccagcctgaggtgcgaggccattggagaccccacccccaccatc
cactggatggcccctgacgaccgtgtccttggcaactcgtcccgaaccgtcgtcaatggc
aacggcaccctggagattctcatcaccacctccaaggactacggtaccttcacctgcatt
gcagccaacgtggccggggagtccaccgcctcagtggatctgtcaatcatccagctgccc
cacctcagcaacggcaccggtcaggcctcacagcccaagtcccgcctctcggacatcacc
ggcaccaccaggataagcaagggggttccaaagacccccccggagaaagtggtcactgtg
tcagaggtgacagccatttcagccttggttaagtggaccgtcagcaagacagcgcccaag
gtaaagatgtaccagctccagtacaactgttccgacgatgaagtcctcatctacaggatg
atcccggcctccagccaggccttcctggtgaccaacctggtgtcggggaccaagtacgac
ttgtgtgtcctagctgcctgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgtgcccagttctttacccgcgacgactacacacagtgccagtctctccacagccag
tttctggggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcgttatcctgatggtgcgctacaaggccaccgaccatgaggggggtggcatcggg
gggagcggcaagctgaccagcgtaagtgacacccactcacagaccaatgggggacggctg
ggacagaacggcgtgccccttcccctgcccaaaccaaaggccaaagtgaccctccaggat
gaagtggtggagtttaaatgtggatccctccagagcacctcgtcctcatcctcatcgggg
ggctcggtggtcggggagggttcctacagtcccaacagcaccctggccattatgtggagg
caggctgccccctctaagcccagggcaaacctggatcacctgctgggggccttcaactcc
ctagagctccggggtgcccagggcaggggagacctgggggagccctcatccagcagtagc
accccggtggcgggtggcgataggccccacacggacagggagcccctactgggccggaca
atggactcgcggctgagccggttgctcatgctgtctcatgactccaaaccaaaaaggagc
cagtcgtttgacatgggggactgtatggatacagatcaacaaacagaccaagcgatggcc
tctagcacctccacagccacaacgccggtgtgcagttacccacggcgcatcagcaacatc
tggactaagaggagcctgtctgtgaacggcatgctgctacagtgtgatgaggaaggggat
atgggggggagcaaggggaccttcgacagccaagagtgggtcatggagagtactgtctag
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