Oncorhynchus mykiss (rainbow trout): 110522557
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Entry
110522557 CDS
T07259
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110522557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110522557
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
U1 related factors
110522557
Complex B
110522557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110522557
NCBI-ProteinID:
XP_036832077
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All DBs
Position
4:complement(35772056..35800279)
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AA seq
877 aa
AA seq
DB search
MSFPHLNRPLLPPGIPPPQFSGFPSGTPMIPVHMGIMTQNPTVLVPTSMPVVSKPAAPRK
EAPLDENNGPTTTVFVGNISEKASDMLIRKLLAKCGLVLSWKRVQGASGKLQGKNRTAFG
FCEYKEPESTLRALRLLHELQIGEKKLLVKVDAKTKAQLDEWKAKKKSSTNGNGKAEAED
GKEEEEEEVIDKDTQMRDQIVKGTIDGLIREYASDLKAPLNDDESQQRRKRKEKKEEEDI
NAIDGLEDDKRDLISREISKFRDTHKKLEEEKDKKEKERAEFERERRERDKERERERERR
DREREKEREKERERERERERERERERSDRDRDRDRNRTKERERERERSRDRSKDRSHSRD
REVSRDKDKKRDQEDEEEVYERRRLERKLRDKEAAYQERLKNWEIRERKKARDYSKESER
EEERRREMAKEGKRLKEFLEDYDDDRDDPKFYRGSALQKRLRDREKETEMDERDRKREKE
ELEEIRQRLLAEGHPDPEAEIRRMEEEAERLRQPPVKLEPDPEEERVHKAPREDRDRRGD
RERERGDRDRERERERGDRDRERERERGDRDRERERERGDRDRERERERGERDRGDHHPH
RHSDDDVEEGEEFDDDDQSGFKPCLKPTLRPITAAPSVSSASGGATPNTPGDESPCGIII
PHENSPPHEAPLPHEALPQDEFRPKIGLSLKLGAPNVTSPSQPNVAIKRKKLTVDSVFNK
FDDEEADEAPRKRKLVPLDYGDDDKNLQSVVDGASGLAAIKGANTEEKRKHIKSLIEKIP
TGKTELFSYPLDWSAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQG
ILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcatctcaaccgacccctgttgccaccgggaatcccgcctccacagttc
tctggttttccttcaggtaccccaatgataccagtccacatgggcatcatgacccagaac
cccacagtcctggtacccacctccatgcccgttgtcagtaagcccgcggcccccaggaag
gaagctcccctggacgagaacaacggccccaccaccacagtgtttgtaggaaacatctcg
gagaaggcctcggacatgctgattcgaaagttgctggcgaaatgtggcctggtcctaagc
tggaagagagtccaaggagcctctggaaaacttcaaggtaaaaacagaacagcttttgga
ttctgtgagtacaaggaaccagagtcgacgctgcgggccctgcgactgctccacgagctg
cagatcggggagaagaagctgctggtgaaggtggatgccaagaccaaggcccagctggac
gagtggaaggccaagaagaagagtagcaccaacggcaacgggaaggcggaagcagaggat
ggaaaagaggaggaagaggaggaggtgatcgacaaggacacccagatgagggaccagatc
gttaagggcaccatcgatggtctgatccgagagtacgccagcgatctcaaagctcccttg
aatgatgatgaatctcagcaacgcaggaaaaggaaagagaaaaaagaggaggaggatatc
aacgcaattgacgggttggaggatgacaagagagacctgatttccagagagatcagtaaa
ttccgtgacacccacaagaaactggaggaggagaaggacaagaaggagaaggagcgtgca
gagtttgagcgcgagcgaagggagagggacaaggagagggagcgtgagagggagcgacgg
gaccgcgagcgggagaaggagagggagaaggagagggagagggagcgcgagagagagcgc
gagagagaacgggaaagaagtgacagagaccgagatcgtgaccgcaaccggacgaaagag
cgagaacgggagagggagaggagccgcgacaggagcaaagaccgcagccactcaagagac
agagaggtgagtcgcgacaaggacaagaagcgtgaccaggaggatgaggaggaggtctac
gagaggagaaggctggagaggaagctcagagacaaggaggcagcctaccaagaacgcttg
aagaactgggagatccgcgagaggaagaaggctcgagactactccaaggagtctgaacgg
gaggaggagcgtaggagagagatggctaaagaaggcaaacgtctgaaggagttcctggag
gactatgatgatgacagggatgaccctaagttctacaggggcagcgcgctgcagaagcgt
ctgcgagacagggagaaggagactgagatggacgagcgcgacaggaagagagagaaggag
gagctggaggagatcagacagaggcttttggccgagggacaccccgaccccgaggccgag
atacgcaggatggaggaggaggcagagcgtctgcgccagcccccggtgaagctggagcca
gatcccgaggaggagcgggtacacaaggcgccacgggaggaccgtgaccgccgaggagac
cgggagagagagcgaggagaccgggacagagaaagggagagagagcgaggagaccgggac
agagaaagggagagagagcgaggagaccgggacagagaaagggagagagagcgaggagac
cgggacagagaaagggagagagagcgaggggagagagaccgaggggaccaccatccccac
cgccactcagatgatgacgtggaagagggggaggagtttgacgacgatgaccaatcgggg
ttcaagccctgcctgaagcccacactgcggccaatcacggcggccccctctgtgtcgtcg
gccagcgggggtgccactcccaacacgcccggggacgagtcaccatgcggtatcatcatc
cctcacgagaactctccccctcacgaggccccgctcccccacgaggccctgccccaggac
gaattccgccccaagattggcctcagtctcaaactgggagcccctaatgttaccagcccc
agccagcccaatgtggccatcaaacgcaagaagctcactgtggacagtgtcttcaacaaa
ttcgacgacgaggaggcggacgaggctccccgcaagcgcaagctggtgccgctggactat
ggcgacgatgacaaaaacctccagagcgtggtggacggcgcctcgggactggcggccatc
aagggcgccaacaccgaggagaagcgcaagcacatcaagagcctgatcgagaagatcccc
acgggcaagacggagttgttctcttacccgctggactggtccgccgtggactcgactctg
atggatcgacgcatacgtccctggatcaataaaaagataattgagtacattggagaagag
gaggctacgctagtggattttgtctgctcaaaggtgatggctcatggtacaccacagggt
atcttggatgatgttgccatggttctggatgaagaagcagaagtcttcatagtcaagatg
tggaggttattgatctatgaaacagaggccaagaagattgggctggtgaaataa
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