Oncorhynchus mykiss (rainbow trout): 110522579
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Entry
110522579 CDS
T07259
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110522579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110522579
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110522579
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110522579
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
110522579
NCBI-ProteinID:
XP_036832113
UniProt:
A0A8C7PXV9
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All DBs
Position
4:complement(37819431..37849092)
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AA seq
776 aa
AA seq
DB search
MALPTANQVSLGRETPKHYGITSPISLVQAKEADLVLTHRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIESVGGKIFTFGSYRLGVHTKGADIDALFVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPKN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVDEFKQGLSITDEILQNKAEWSKL
FDAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESREKEEVSTMWVIGVIFKKMETSENLNVDLTIDIQSFTDTVYRQAISSKMFEADM
KIQAMHVKKRQLHQLLPSLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTALSA
AVPTSTPVKSGPLGPPPSPIAAAASQPEIQASTMSPPAVKRPGSPMQEERKRLKSDSEES
ATERQTSGDSVPSSQTTSPPPTMGPPAAPQTPSPPATMGPPAAPQTPSLPATMGPPVAHK
TPSPPPTIGPPVAHKTPNQEVLEEKSPKEHQMEDPSIVPETKTEDSGAASVGEGGTSVEA
EVNEDSISEEMAASEGEVKMEANITRMVSTDLSDVPLLPANPIPVVKNSIKLRLSR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccaactgctaaccaggtgtcgttgggtcgggagactcccaagcactatggg
atcacttctcctatcagcctggtccaagctaaggaggctgaccttgtcctcacacacagg
ctgactgaggccctgaaaccgtacggggtgtttgaagaggagctggaactacaacgcaga
atacacgtgttgggaaaactgaacacactggtgaaggaatggattcgtgacgtcagtgag
acaaagaatctgcctgcctcggtgattgagtctgtcggagggaagatattcacatttggg
tcgtacaggttaggagttcacactaaaggggcagacatcgacgccctgtttgtggctcct
cgacatgtggagagaacagacttcttctcctcgttcctggacaagctgaaggagcaggag
gaagtcaaggatttgagggctgttgaggaggcatttgtcccggtgataaagctgtctttc
gacagcattgagatcgacatcctgtttgcacggttagctttgcaaacaatcccaaagaat
ctggacctccgagatgacgggctgctgaagaaccttgacatccgctgcattaggagtctc
aatggttgcagagttacagatgagatcctccatcttgtacccaacattgagaacttcaga
ctgactctgaggaccatcaagctgtgggctaaacgtcataacatctacagtaacatcctg
ggcttcctgggtggagtctcctgggccatgctggtagccaggacctgccagctctacccc
aacgccgtggcctccactctcgtacacaagtttttcctcgtcttctctaagtgggaatgg
cccaacccggttctcctgaagcagcccgaggactgcaacctgaacctgccagtctgggac
cccagggtgacacccagtgaccggtaccacctgatgcccatcatcacaccagcctacccc
cagcagaactccacctacaacgtctccgtctccacacgggctgtcatggtggacgagttc
aaacagggtctgtccatcacagatgaaattttgcagaataaagcagagtggtccaaacta
tttgacgcaccaaacttctttcagaaatacaagcattatattgtgttgctagcaagcgcc
cccaccgagaagcagcacctggaatgggttggtctagttgagtctaagatcaggatcctt
gtgggaaacctggagaagaatgagttcataacgttggcccatgtcaacccccagtcattc
cctggacccaaggaaagcagggaaaaagaggaggtcagcaccatgtgggtgataggggtt
atctttaagaagatggagacatcagagaacctcaacgttgacctgaccattgacatccag
tcctttactgacacggtgtatcgccaggccatcagcagtaagatgttcgaggcagacatg
aagatccaggccatgcatgtgaagaagagacaactgcatcagctactgcccagcctggtc
atgcccaaacgcagaaagcactctacagaggggcttcgtcagatgaatgacagtagtctg
gacctatcgctggacagtgacaacagcatgtcagtgccctcccccacagccttgtcagcc
gcagtgcccacgtcgaccccagtgaagagtggcccgctaggtccccctcccagtcccatc
gcggcagcagccagccaaccagagatccaagcttccactatgagtccgccagctgtgaag
agacctggttcccctatgcaagaagagaggaagaggttaaaatcagactctgaggagtca
gccactgagagacagacctcaggagactccgtccccagcagccagaccacctctcctccc
cccaccatgggtcctccagcggccccccaaaccccctcccctcccgctaccatgggtcct
ccagcggccccccaaaccccctcccttcccgctaccatgggtcctccagtggcccacaag
accccctctcctccccccaccataggtcccccagtggcccacaagacccctaaccaggag
gtgctggaggagaagagccctaaggagcaccagatggaggacccctccatagtcccagag
acaaagacagaggatagtggtgcagctagcgttggagaggggggcacctctgtggaggca
gaggtcaatgaggacagtatatctgaggagatggcggcttctgaaggggaagtgaagatg
gaggcaaacattacgagaatggtgagtacggatctgtctgacgtgcctctcttgccagcc
aaccccattccagtggtgaagaactctatcaagcttcgtctcagcaggtag
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integrated database retrieval system
