Oncorhynchus mykiss (rainbow trout): 110522591
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Entry
110522591 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110522591
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110522591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110522591
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110522591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110522591
NCBI-ProteinID:
XP_036832129
Ensembl:
ENSOMYG00000014976
UniProt:
A0A8C7Q4I8
LinkDB
All DBs
Position
4:38890314..38897681
Genome browser
AA seq
327 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGGRFPDRYGRGSQDSRRTNQPSGPPA
DRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDL
KNALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRS
HSPKARSPKRDYKRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSSKRPSKPSKSASPNS
TPPAQRAPSRSPSRSRGSRSPSTDSRH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtgggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagaggggctttggt
tttgtggagtttgatgatcctagggatgctgaggatgcagtttatgagttggacggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcga
ggacgtggtggtgacagagggggaggaggaggaggaggaggaggaggccgcttcccagat
cgctatggccgtggctcccaggatagtcggaggaccaaccaaccaagtggaccaccggca
gataggaaccccccaccgatgcgcacggagaaccgtctcatcgtggagaacctgtcatct
cgcgtcagctggcaggacctgaaggatttcatgagacaggctggggaagtcacctttgca
gacgcacaccgccccaagctcaacgaaggagtggttgagttcgcttcttacagcgacctg
aaaaacgcccttgagaagctgtctggcaaggagatcaatggaaggaaaatcaaactgatc
gaggcagctaagaagaggggttcaaggagtcgttcccgctctgagagctcttctcgttct
cgctcccgttctcgtaaccgttccccgtcccgctccaggacccctcgtcgttccaggtcc
cactcccccaaagcccgctcccccaagagggactacaaacgctctcgttctcgttcccac
agcggctccccagcgccccgtgctgctgcccctggctccccacccccgagggccaaagag
acctcttcctcctcctctaaacgaccctctaagcccagcaagtctgcctcccccaactcc
actccccctgcacagcgtgcaccttccaggtctccttccaggtctcgtggctctcgctcc
ccgtctacggacagccgccactga
DBGET
integrated database retrieval system
