KEGG   Oncorhynchus mykiss (rainbow trout): 110522657
Entry
110522657         CDS       T07259                                 
Name
(RefSeq) transcription factor Sox-7
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110522657
Transcription factors [BR:omy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110522657
SSDB
Motif
Pfam: HMG_box HMG_box_2 Sox17_18_mid HMG_WDHD1 YABBY
Other DBs
NCBI-GeneID: 110522657
NCBI-ProteinID: XP_021456811
UniProt: A0A8C7SHF3
LinkDB
Position
4:complement(42913317..42916945)
AA seq 451 aa
MAALISAYSSWPESFECSAGDGDVPDGHGSHRTPVDKASEPRIRRPMNAFMVWAKDERKR
LAVQNPDLHNAELSKMLGKSWKALTPSQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQL
KRICKRVDPGFLLGSLAGPDQNALSDPRGLCHPLGLDKDEDGISGGDGGVGFSSLSSRSP
GPLPGVRSFRDVPSSSNSFDTYPYGLPTPPEMSPLDHDHPSYYPSSSSSSSSVSSPEERH
QHRQGQTPGGGGGGPMCLSPSSYHPDYTPTQTSIHCGGSHSHLTHLSHLSQTQSGGLIPG
HPLSYYNPSSWSSQLQVHPGLNHPHLRHLSPGHHQQHHLGQLSPPPEQNHSHLETLDQLS
QVELLGEVDRDEFDQYLNSTVAGAAAAGVGVFRSEQGGGGGGGGGTMTVTGHIQVTSASA
PSSESSVVGETSLISVLADATAAYYNNYGIS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggctgcactgatcagcgcgtactcgtcttggccggagagctttgagtgctcggcggga
gatggagacgtgcccgacggacatggctcacacagaactcccgtggacaaggcgtcggag
ccgcgcatcaggcggcccatgaatgcgttcatggtctgggccaaagatgagaggaagcgc
ctggctgtccaaaacccagacctgcacaacgcagagctcagtaaaatgctaggcaagtcg
tggaaggcgctgaccccctctcagaagcgtccctacgtggaggaggccgagaggttgcgc
gtgcaacacatgcaggactaccccaactacaagtatcgccctcgtcgcaagaagcagcta
aaacgcatctgtaaacgcgtggaccccggcttcctgctgggcagcctggcgggccccgac
cagaatgccttgtccgacccccggggcctctgccaccccttgggtttggataaggacgag
gatgggattagtggtggtgacggaggtgttgggttctcgtccctctcttcccgcagccca
ggacctctacctggggttagatccttcagagacgtaccgtccagctccaacagcttcgac
acctatccctacggcctccccaccccgcctgagatgtcccctctggatcacgaccacccc
tcctactacccttcttcctcttcctcctcctcgtccgtctcttcccccgaggagcgccac
cagcaccgtcagggtcagacccccggaggtggaggtgggggtcccatgtgcctcagtcct
tcatcctaccaccctgactacaccccaactcagacttccattcactgtggtggctcccac
tcccacctgacccacctctcccacttgtcccagacccagtccggaggcctcatccctggg
catcctctgtcctactacaacccatcctcctggtcctcccagctccaggtccacccgggc
ctcaatcaccctcacttaaggcacctttccccaggtcaccaccaacagcaccacttgggt
cagctatcccctcctcccgagcagaaccacagtcacctggagactttggaccagctgagt
caggtagagcttctaggggaggtcgaccgcgatgagttcgaccagtacctgaactcgacg
gtggcaggcgctgcagcagcaggggtgggggtgttccgttccgaacagggaggaggagga
ggaggaggaggaggaacgatgacggtgaccggtcacatccaggtgacatcggcctcagct
ccgtcttctgaaagcagcgtcgtcggggaaaccagcctgatctctgtgctggcggacgcc
acggcagcatactacaacaactacggcatctcttag

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