Oncorhynchus mykiss (rainbow trout): 110522657
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Entry
110522657 CDS
T07259
Name
(RefSeq) transcription factor Sox-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110522657
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110522657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox17_18_mid
HMG_WDHD1
YABBY
Motif
Other DBs
NCBI-GeneID:
110522657
NCBI-ProteinID:
XP_021456811
UniProt:
A0A8C7SHF3
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All DBs
Position
4:complement(42913317..42916945)
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AA seq
451 aa
AA seq
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MAALISAYSSWPESFECSAGDGDVPDGHGSHRTPVDKASEPRIRRPMNAFMVWAKDERKR
LAVQNPDLHNAELSKMLGKSWKALTPSQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQL
KRICKRVDPGFLLGSLAGPDQNALSDPRGLCHPLGLDKDEDGISGGDGGVGFSSLSSRSP
GPLPGVRSFRDVPSSSNSFDTYPYGLPTPPEMSPLDHDHPSYYPSSSSSSSSVSSPEERH
QHRQGQTPGGGGGGPMCLSPSSYHPDYTPTQTSIHCGGSHSHLTHLSHLSQTQSGGLIPG
HPLSYYNPSSWSSQLQVHPGLNHPHLRHLSPGHHQQHHLGQLSPPPEQNHSHLETLDQLS
QVELLGEVDRDEFDQYLNSTVAGAAAAGVGVFRSEQGGGGGGGGGTMTVTGHIQVTSASA
PSSESSVVGETSLISVLADATAAYYNNYGIS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgatcagcgcgtactcgtcttggccggagagctttgagtgctcggcggga
gatggagacgtgcccgacggacatggctcacacagaactcccgtggacaaggcgtcggag
ccgcgcatcaggcggcccatgaatgcgttcatggtctgggccaaagatgagaggaagcgc
ctggctgtccaaaacccagacctgcacaacgcagagctcagtaaaatgctaggcaagtcg
tggaaggcgctgaccccctctcagaagcgtccctacgtggaggaggccgagaggttgcgc
gtgcaacacatgcaggactaccccaactacaagtatcgccctcgtcgcaagaagcagcta
aaacgcatctgtaaacgcgtggaccccggcttcctgctgggcagcctggcgggccccgac
cagaatgccttgtccgacccccggggcctctgccaccccttgggtttggataaggacgag
gatgggattagtggtggtgacggaggtgttgggttctcgtccctctcttcccgcagccca
ggacctctacctggggttagatccttcagagacgtaccgtccagctccaacagcttcgac
acctatccctacggcctccccaccccgcctgagatgtcccctctggatcacgaccacccc
tcctactacccttcttcctcttcctcctcctcgtccgtctcttcccccgaggagcgccac
cagcaccgtcagggtcagacccccggaggtggaggtgggggtcccatgtgcctcagtcct
tcatcctaccaccctgactacaccccaactcagacttccattcactgtggtggctcccac
tcccacctgacccacctctcccacttgtcccagacccagtccggaggcctcatccctggg
catcctctgtcctactacaacccatcctcctggtcctcccagctccaggtccacccgggc
ctcaatcaccctcacttaaggcacctttccccaggtcaccaccaacagcaccacttgggt
cagctatcccctcctcccgagcagaaccacagtcacctggagactttggaccagctgagt
caggtagagcttctaggggaggtcgaccgcgatgagttcgaccagtacctgaactcgacg
gtggcaggcgctgcagcagcaggggtgggggtgttccgttccgaacagggaggaggagga
ggaggaggaggaggaacgatgacggtgaccggtcacatccaggtgacatcggcctcagct
ccgtcttctgaaagcagcgtcgtcggggaaaccagcctgatctctgtgctggcggacgcc
acggcagcatactacaacaactacggcatctcttag
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