KEGG   Oncorhynchus mykiss (rainbow trout): 110522688
Entry
110522688         CDS       T07259                                 
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
  KO
K20163  DENN domain-containing protein 4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110522688 (dennd4a)
Membrane trafficking [BR:omy04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    110522688 (dennd4a)
SSDB
Motif
Pfam: DENN dDENN uDENN PPR_2 PPR_3 PPR_long PPR
Other DBs
NCBI-GeneID: 110522688
NCBI-ProteinID: XP_036824454
LinkDB
Position
30:complement(1861818..1973408)
AA seq 2245 aa
MMEETGPRIADYFVVAGLTDSSKPLEEELQLDDVPGRSPRSAPGGRPLAPITDVAVVICS
LGEAVPQGYTCLESTPSGLSAELNGASLRGPQIYLCYKRGRDKPPLTDLGVLYEWKEKLK
PGCHIVQTTPSGRPANISSSSSQRIYITYRRSPQSQPHTSLAVTDVCIIIPGKGETPPHT
FCKVDKNLNSSMWGSSVYLCYKKSLAKTNTIAYNAGLLCRYPEEDDESFPLPESVPLFCL
PMGASIEFWPAHTKHSLPVFSTFVLTGASGDKVYGAAIQFYEPYPEDQLSDRQRSLLGLP
STCSSSEGTKSVHANKSICLLSHWPFFDSFRNFLTFLYRYSISGPHALPIEKHISHFMHK
VPFPSSQRPRILLQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNATTLLVLAVTE
HKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYF
DLYVPPPDVCCVDLDTNNILHKEEKRALTWKILPQKACKHLLNTLGRLYQQLTEGGQVSG
EDGQMEPTAIDPDLASGGKSLHTLEMQIQEAFLRFMAAILKGYRSYLLPITQAPSERTTD
ASSLFDLQGFLKSRDRSHQKFYSQMIKTQMFIRFIEECSFVSDKDASLAFFDECVDKIYS
NGSKIQMDSDGPEDTRLIELDESHRSEHTVYINPPELRLLAQGEEHPLCYSYSGFPVLSR
DLLELQDGPRPSSASLTQRHTSPASPAAIFRRSKQEIRSAQRMAKTHASVPQMWSKCLLR
HCYGLWFICLPAYASACHSKVRALRMAYDILRKMQDKKLQAPDEVCYRVLMQLCGQYSQP
VLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSTGSRGGYFLWAKLRNVVLGVGRFK
QTVQNHNQNQTQSRDTQLSDYSDLDTVSHGSEDSTNDSVERVSIDTDFTKMDSSDDGSST
GGQSDQGYDSLSKEEERMVGRDSDRTPLAQEKSERESCPLTRQDHTTSPGDSKTPCGTRP
KNRRLRPNSLDLTGGQGTLRTITLNFTSTTMQVRGPAPKRPPPPNCKPGKAEASQAVPTQ
NQKRLDGGEGEEVEGSKDRQTPAKEVERRSVNISVGDTERPVTHSVSGDGVVTHSVSGDG
VVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSV
SGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTH
SVSGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGAVTHSVSGDGVV
THSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSVSGDGAVTHSVSGDG
DGVVTHSVSGDGVVTHSVSGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSG
DGAVTHSVSGDGVVTHSVSGDGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGIVTHSV
SGDGVVTHSVSGDGIVTHSVSGDGIVTHSVSGDGVVTHSVSGDGDGPADCSVSKQNSVRN
SSETVGGAVKRTSIVETGFDPLSIIAAEMETEGDGDSSSTSTARRDLAEEIEMYMKVLSP
LSSRTASVDLQNPSSPLLHATSTPSEHSSRRPRPLSLTHSPCTSPRPPPPLLRANSHLPL
SRPKERLRPSSLVSPSSPTLSLDMFKSSFLSAGKGVAEKASRLYSRLSSQTSLSQDVNCD
QISVSSMTSVDPECTSLLEEGSVLDPEGFTSSYASPQHDSIACLRRSPARGRLVSQSPTS
PCKVFRHNSFSSGLAPPSRGPQTPDSSPDASRFYLRHHYTTEVLMSSCCRCQTCDCLVYD
EEIMAGWTADDSNLNTTCPFCGSSFLPFLTVHIRDLRHRTSDESHQPLGEDTAASANPET
AAGALTPQSTTAPAAEQQDTEGVAGCPQDPVPGTTSDPISAPSPTSAPPPTSPPPPASPP
SPASTTTRSSPVSSSPTPTPSPSPPAPVTVPYLSPLVLWKELESLLGNEGDQVISSPSIV
DQHPIVFWNLVWCYRRLELPSHLPGLILTSQHCSQGHVSQVPAQSVSSEDSKHVLVRILW
DNPSLHQDSVQALYMLWHAHFSLPSASGTVYEEGQPQDHLFSSEVLQVAVRNIQKGDVYQ
PMSQILQLLGPELGFNRQRSLYRDLLFLALTALGKSNINIDAFDREYKVAYDRLSPSQVK
LTHNCDRPPGAGVMECRRMFGKPIL
NT seq 6738 nt   +upstreamnt  +downstreamnt
atgatggaggagacaggtcctcgcatagcagactactttgtggtagcagggctcactgac
tcctccaagcccttagaggaggaactgcagctggacgatgttcctggtcgctctccccgc
tcggcccctggtggccggcccctggcccccatcacagacgtagctgtggttatatgctca
ctgggggaagcggttcctcagggttacacctgcctcgagtccaccccgtctggtctgtct
gcagagctgaacggagccagtctcagagggcctcagatctacctctgctacaagagaggc
cgagataagcctcctctcactgacctgggggttctgtatgagtggaaggagaagctgaag
cctggctgtcacatcgtccaaaccactccctctggtcgtcctgccaacatcagtagctcc
tcctcccagcgcatctacatcacctatcgccgctccccgcagagccagcctcacacgtca
ttggctgtcacagatgtctgcatcatcatcccgggcaaaggggagacgccccctcacacc
ttctgcaaggtggacaagaacctcaacagtagtatgtggggatcctcggtgtacctgtgt
tacaagaagtcactggctaaaaccaacacaatcgcatacaacgcaggtctgttgtgtagg
tacccagaggaggacgatgagtcttttcccctgccggagtctgttcctctgttctgtctg
cccatgggagctagcattgagttctggccagctcacaccaaacactccctgcctgtcttc
tctacttttgtactgactggggcctctggagacaaggtgtatggagctgccatccagttc
tatgagccgtacccggaggaccagctgagtgacagacagcgttctctgctggggctaccg
agcacatgcagtagcagcgaggggacaaagagcgttcacgctaacaagagtatctgtttg
ctgtcacactggccgttctttgactcattcaggaacttcctgacgtttctctacagatac
tccatctctggaccacacgctctgcccatagagaagcacatctcccacttcatgcacaaa
gtcccgttcccctcgtcacagagaccacgcatcctgctacagctgtctccacatgatagt
ctgatgctgagccagcctgtctcctcccctctgcctctcagtggtggtcgtctctccact
ctgctccttaacctgggccctaagaacgcgaccactctgctggtgctggccgtaacagaa
cacaagatcctggtccactctctcagaccggccgtactgaccagtgtgacggaggccctg
gtgtcgatgatcttccccttccactggccgtgcccctacatccctctgtgccctctggcc
ctggcagatgttctctctgccccttgccccttcatcgtgggcgtcgactcacgttacttt
gacctctacgtgcctccgcccgacgtctgctgtgtcgacctggacaccaacaacatatta
cataaggaggagaagagggccctaacatggaagatactaccacagaaagcctgcaaacat
ctcctcaataccctgggtagactgtaccaacagctgactgaaggtggccaagtcagcggc
gaggatggtcagatggagcccactgcgattgacccagacctggcgagcggagggaagagc
ctccacacgctagagatgcagatccaggaagccttccttaggttcatggcggccatattg
aaagggtaccgctcttacctcctccccatcacgcaggccccctccgaaaggaccacggac
gcaagctcgctgttcgacttgcaagggttcttgaagagccgggatcgttcccaccagaag
ttctactcccagatgatcaagacccagatgtttatccggttcatcgaggaatgttccttt
gtcagcgataaagacgccagtctggccttcttcgacgagtgtgttgataagatttacagc
aatggaagcaagattcagatggacagtgatggaccagaagacaccaggttgatagagctg
gacgagtcccatcgcagtgaacacacagtctacatcaaccctcctgaactaagactgttg
gctcagggagaggagcacccactctgctatagctactcagggtttccggtgctgagtcgt
gatttgttggagctccaggatggacctcgcccctcctcagccagcctgacacagagacac
accagtccagccagccctgctgccatctttaggcgctccaaacaggagattcgctcggcc
cagcggatggctaaaacccacgcctccgtaccccagatgtggtctaagtgtctgctgcgt
cactgttacggcctgtggttcatatgcctaccagcttacgccagcgcatgccactccaaa
gtgcgggcactacgcatggcctacgacatcctgaggaagatgcaggacaagaagctacag
gcacctgatgaggtgtgttaccgggtgttaatgcaactatgtggacagtacagccaacca
gtcctggcggtcagagttctgtttgagatgaagaaggctggagttcatcccaacgccatc
acctacggttactacaacaaggcggtgttggagagcacgtggccgtccacaggaagtaga
ggaggctacttcctgtgggccaagctgaggaacgtggtcctgggggtaggacggttcaaa
cagacggtccagaaccacaaccagaaccaaacccagagtagagacacacagctatcagac
tacagtgatctggacacagtcagtcatggcagtgaagacagtactaacgactcagttgag
cgggtctcaatcgatacagacttcactaagatggactccagtgatgatggatccagcaca
gggggccaatcagaccaaggctatgactctctatctaaggaggaggagaggatggtggga
agggacagcgacagaacaccactagcgcaggagaagtcagagagggagtcttgtcctctg
actagacaggaccacaccaccagccctggtgactccaaaactccctgtggtaccagacca
aagaaccggaggctgaggcccaactccctggacctgaccggaggacaggggactctcagg
accatcacactcaacttcacctccaccaccatgcaggtccgaggccctgctccaaaacgc
cccccgcctccgaactgcaaacctgggaaggctgaggccagtcaggcggtgcctacccag
aaccagaagagattggatgggggagagggggaggaagtagaaggcagtaaggacagacag
acacctgccaaagaggtggaaaggaggagtgtgaacatcagtgttggagacactgaaagg
cctgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtggagatggg
gttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtggagatgga
gatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggagacggggttgtaacccac
agtgttagtggagatggggcagtaacccacagtgttagtggagatggggttgtaacccac
agtgttagtggagatggggttgtaacccacagtgttagtggagatggagacggggttgta
acccacagtgttagtggagatggggcagtaacccacagtgttagtggagatggggttgta
acccacagtgttagtggagatggggttgtaacccacagtgttagtggagatggggttgta
acccacagtgttagtggagatggggacggggttgtaacccacagtgttagtggagatggg
gttgtaacccacagtgttagtggagatggggctgtaacccacagtgttagtggagatggg
gacggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggcagtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggctgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggagatggggctgtaacccacagtgttagtggagatggtgttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatgggattgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatgggattgtaacccacagtgtt
agtggagatgggattgtaacccacagtgttagtggagacggggttgtaacccacagtgtt
agtggagatggagacgggcctgcagattgcagtgtctccaaacagaacagtgtaagaaac
agcagtgaaaccgtgggcggagccgtgaagaggacaagtatcgttgagactggcttcgac
cctctgtccattatagcagctgagatggagacagagggtgatggggacagtagcagtacc
tccacagcccgccgggacctggcagaagagatagagatgtacatgaaggttctgagccct
ctgagcagcaggaccgccagcgtggaccttcagaacccatccagcccgctactccacgcc
acctccaccccatctgaacactcctcccgccgacctcggcccctcagcctgacccactcc
ccctgtacctccccccgaccacctcctcccttgcttcgtgccaactcacacctccccctc
tccaggcccaaagaacgtctccgtccctcctccctggtctccccctcctccccaactctc
agtctggacatgtttaagagcagcttcctgtcagcagggaagggggtggctgagaaggcc
agcaggctctactcccgcctgtcatcacagacatcactctcacaggatgtgaactgcgac
cagatcagcgtgtcatcaatgacctcagtggacccagaatgcacctctctgttggaggag
ggctctgtcctggaccctgaaggtttcacctcctcctacgcctcgccccagcacgacagc
atcgcgtgcctgaggaggagcccagccaggggacgcctcgtctctcagagccccacctcg
ccctgcaaggtgttccgccacaactccttctctagtggtttggctcctccatctagaggt
ccccagactccagactcttctcctgatgcctcccgcttctacctccgtcaccactacact
actgaggtgttgatgtctagctgctgtcgctgtcagacatgtgactgtctggtgtatgat
gaagagatcatggcaggatggacggctgatgactccaacctcaacaccacctgtcccttc
tgtggctcttccttcctgcccttccttactgtacacatcagggacctgagacacaggacc
agtgacgagagtcaccaacctttaggagaggacacggctgcctcagccaaccctgagact
gcagctggagcactgacaccccagtcaaccacagctccagcagcagagcaacaggacact
gagggtgtagctgggtgtccacaggaccctgtcccaggcacaacttcagatccaatctca
gccccatctccaacctcagccccacctccaacctctcccccacctccagcctctccccca
tcccctgcctcaactacaactcgtagttccccagtgagtagttctccaaccccaacccca
tccccatctcccccagccccggtgacggttccctacctgagtcccttggttctgtggaaa
gagctagagtctctgctgggtaatgagggggaccaggtgatcagttctcccagcatcgtg
gaccagcaccctatcgtattctggaacctggtgtggtgctaccgcagactggaactcccc
tctcatctgcccggtctcatactgacctcacagcactgcagccagggacacgtatcgcag
gtcccagcccagagcgtgtcttcagaggacagtaaacatgtcctggttcgcatcctgtgg
gacaacccgtcactccaccaggactctgtccaggccctatacatgctctggcacgcacac
ttctctctcccctcagccagtggaacggtgtatgaggagggccagccccaggaccatctc
ttctcctctgaggtcctacaggttgcagtgaggaacatccagaagggggatgtctaccag
cccatgagtcagatcctacagctgctgggaccagagctgggcttcaacagacagaggagt
ctgtacagagatctcctcttcctggcgttgaccgctctggggaagagcaacatcaatatt
gatgcgtttgatcgtgagtacaaggttgcttacgaccgcctcagccccagccaagtgaag
ctgacacacaactgtgaccggcccccgggagcaggagtcatggaatgtagaaggatgttc
gggaaacccattctgtga

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