Oncorhynchus mykiss (rainbow trout): 110522688
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Entry
110522688 CDS
T07259
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110522688 (dennd4a)
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110522688 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
110522688
NCBI-ProteinID:
XP_036824454
LinkDB
All DBs
Position
30:complement(1861818..1973408)
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AA seq
2245 aa
AA seq
DB search
MMEETGPRIADYFVVAGLTDSSKPLEEELQLDDVPGRSPRSAPGGRPLAPITDVAVVICS
LGEAVPQGYTCLESTPSGLSAELNGASLRGPQIYLCYKRGRDKPPLTDLGVLYEWKEKLK
PGCHIVQTTPSGRPANISSSSSQRIYITYRRSPQSQPHTSLAVTDVCIIIPGKGETPPHT
FCKVDKNLNSSMWGSSVYLCYKKSLAKTNTIAYNAGLLCRYPEEDDESFPLPESVPLFCL
PMGASIEFWPAHTKHSLPVFSTFVLTGASGDKVYGAAIQFYEPYPEDQLSDRQRSLLGLP
STCSSSEGTKSVHANKSICLLSHWPFFDSFRNFLTFLYRYSISGPHALPIEKHISHFMHK
VPFPSSQRPRILLQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNATTLLVLAVTE
HKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYF
DLYVPPPDVCCVDLDTNNILHKEEKRALTWKILPQKACKHLLNTLGRLYQQLTEGGQVSG
EDGQMEPTAIDPDLASGGKSLHTLEMQIQEAFLRFMAAILKGYRSYLLPITQAPSERTTD
ASSLFDLQGFLKSRDRSHQKFYSQMIKTQMFIRFIEECSFVSDKDASLAFFDECVDKIYS
NGSKIQMDSDGPEDTRLIELDESHRSEHTVYINPPELRLLAQGEEHPLCYSYSGFPVLSR
DLLELQDGPRPSSASLTQRHTSPASPAAIFRRSKQEIRSAQRMAKTHASVPQMWSKCLLR
HCYGLWFICLPAYASACHSKVRALRMAYDILRKMQDKKLQAPDEVCYRVLMQLCGQYSQP
VLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSTGSRGGYFLWAKLRNVVLGVGRFK
QTVQNHNQNQTQSRDTQLSDYSDLDTVSHGSEDSTNDSVERVSIDTDFTKMDSSDDGSST
GGQSDQGYDSLSKEEERMVGRDSDRTPLAQEKSERESCPLTRQDHTTSPGDSKTPCGTRP
KNRRLRPNSLDLTGGQGTLRTITLNFTSTTMQVRGPAPKRPPPPNCKPGKAEASQAVPTQ
NQKRLDGGEGEEVEGSKDRQTPAKEVERRSVNISVGDTERPVTHSVSGDGVVTHSVSGDG
VVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSV
SGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTH
SVSGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGAVTHSVSGDGVV
THSVSGDGVVTHSVSGDGVVTHSVSGDGDGVVTHSVSGDGVVTHSVSGDGAVTHSVSGDG
DGVVTHSVSGDGVVTHSVSGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGVVTHSVSG
DGAVTHSVSGDGVVTHSVSGDGDGAVTHSVSGDGVVTHSVSGDGVVTHSVSGDGIVTHSV
SGDGVVTHSVSGDGIVTHSVSGDGIVTHSVSGDGVVTHSVSGDGDGPADCSVSKQNSVRN
SSETVGGAVKRTSIVETGFDPLSIIAAEMETEGDGDSSSTSTARRDLAEEIEMYMKVLSP
LSSRTASVDLQNPSSPLLHATSTPSEHSSRRPRPLSLTHSPCTSPRPPPPLLRANSHLPL
SRPKERLRPSSLVSPSSPTLSLDMFKSSFLSAGKGVAEKASRLYSRLSSQTSLSQDVNCD
QISVSSMTSVDPECTSLLEEGSVLDPEGFTSSYASPQHDSIACLRRSPARGRLVSQSPTS
PCKVFRHNSFSSGLAPPSRGPQTPDSSPDASRFYLRHHYTTEVLMSSCCRCQTCDCLVYD
EEIMAGWTADDSNLNTTCPFCGSSFLPFLTVHIRDLRHRTSDESHQPLGEDTAASANPET
AAGALTPQSTTAPAAEQQDTEGVAGCPQDPVPGTTSDPISAPSPTSAPPPTSPPPPASPP
SPASTTTRSSPVSSSPTPTPSPSPPAPVTVPYLSPLVLWKELESLLGNEGDQVISSPSIV
DQHPIVFWNLVWCYRRLELPSHLPGLILTSQHCSQGHVSQVPAQSVSSEDSKHVLVRILW
DNPSLHQDSVQALYMLWHAHFSLPSASGTVYEEGQPQDHLFSSEVLQVAVRNIQKGDVYQ
PMSQILQLLGPELGFNRQRSLYRDLLFLALTALGKSNINIDAFDREYKVAYDRLSPSQVK
LTHNCDRPPGAGVMECRRMFGKPIL
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagacaggtcctcgcatagcagactactttgtggtagcagggctcactgac
tcctccaagcccttagaggaggaactgcagctggacgatgttcctggtcgctctccccgc
tcggcccctggtggccggcccctggcccccatcacagacgtagctgtggttatatgctca
ctgggggaagcggttcctcagggttacacctgcctcgagtccaccccgtctggtctgtct
gcagagctgaacggagccagtctcagagggcctcagatctacctctgctacaagagaggc
cgagataagcctcctctcactgacctgggggttctgtatgagtggaaggagaagctgaag
cctggctgtcacatcgtccaaaccactccctctggtcgtcctgccaacatcagtagctcc
tcctcccagcgcatctacatcacctatcgccgctccccgcagagccagcctcacacgtca
ttggctgtcacagatgtctgcatcatcatcccgggcaaaggggagacgccccctcacacc
ttctgcaaggtggacaagaacctcaacagtagtatgtggggatcctcggtgtacctgtgt
tacaagaagtcactggctaaaaccaacacaatcgcatacaacgcaggtctgttgtgtagg
tacccagaggaggacgatgagtcttttcccctgccggagtctgttcctctgttctgtctg
cccatgggagctagcattgagttctggccagctcacaccaaacactccctgcctgtcttc
tctacttttgtactgactggggcctctggagacaaggtgtatggagctgccatccagttc
tatgagccgtacccggaggaccagctgagtgacagacagcgttctctgctggggctaccg
agcacatgcagtagcagcgaggggacaaagagcgttcacgctaacaagagtatctgtttg
ctgtcacactggccgttctttgactcattcaggaacttcctgacgtttctctacagatac
tccatctctggaccacacgctctgcccatagagaagcacatctcccacttcatgcacaaa
gtcccgttcccctcgtcacagagaccacgcatcctgctacagctgtctccacatgatagt
ctgatgctgagccagcctgtctcctcccctctgcctctcagtggtggtcgtctctccact
ctgctccttaacctgggccctaagaacgcgaccactctgctggtgctggccgtaacagaa
cacaagatcctggtccactctctcagaccggccgtactgaccagtgtgacggaggccctg
gtgtcgatgatcttccccttccactggccgtgcccctacatccctctgtgccctctggcc
ctggcagatgttctctctgccccttgccccttcatcgtgggcgtcgactcacgttacttt
gacctctacgtgcctccgcccgacgtctgctgtgtcgacctggacaccaacaacatatta
cataaggaggagaagagggccctaacatggaagatactaccacagaaagcctgcaaacat
ctcctcaataccctgggtagactgtaccaacagctgactgaaggtggccaagtcagcggc
gaggatggtcagatggagcccactgcgattgacccagacctggcgagcggagggaagagc
ctccacacgctagagatgcagatccaggaagccttccttaggttcatggcggccatattg
aaagggtaccgctcttacctcctccccatcacgcaggccccctccgaaaggaccacggac
gcaagctcgctgttcgacttgcaagggttcttgaagagccgggatcgttcccaccagaag
ttctactcccagatgatcaagacccagatgtttatccggttcatcgaggaatgttccttt
gtcagcgataaagacgccagtctggccttcttcgacgagtgtgttgataagatttacagc
aatggaagcaagattcagatggacagtgatggaccagaagacaccaggttgatagagctg
gacgagtcccatcgcagtgaacacacagtctacatcaaccctcctgaactaagactgttg
gctcagggagaggagcacccactctgctatagctactcagggtttccggtgctgagtcgt
gatttgttggagctccaggatggacctcgcccctcctcagccagcctgacacagagacac
accagtccagccagccctgctgccatctttaggcgctccaaacaggagattcgctcggcc
cagcggatggctaaaacccacgcctccgtaccccagatgtggtctaagtgtctgctgcgt
cactgttacggcctgtggttcatatgcctaccagcttacgccagcgcatgccactccaaa
gtgcgggcactacgcatggcctacgacatcctgaggaagatgcaggacaagaagctacag
gcacctgatgaggtgtgttaccgggtgttaatgcaactatgtggacagtacagccaacca
gtcctggcggtcagagttctgtttgagatgaagaaggctggagttcatcccaacgccatc
acctacggttactacaacaaggcggtgttggagagcacgtggccgtccacaggaagtaga
ggaggctacttcctgtgggccaagctgaggaacgtggtcctgggggtaggacggttcaaa
cagacggtccagaaccacaaccagaaccaaacccagagtagagacacacagctatcagac
tacagtgatctggacacagtcagtcatggcagtgaagacagtactaacgactcagttgag
cgggtctcaatcgatacagacttcactaagatggactccagtgatgatggatccagcaca
gggggccaatcagaccaaggctatgactctctatctaaggaggaggagaggatggtggga
agggacagcgacagaacaccactagcgcaggagaagtcagagagggagtcttgtcctctg
actagacaggaccacaccaccagccctggtgactccaaaactccctgtggtaccagacca
aagaaccggaggctgaggcccaactccctggacctgaccggaggacaggggactctcagg
accatcacactcaacttcacctccaccaccatgcaggtccgaggccctgctccaaaacgc
cccccgcctccgaactgcaaacctgggaaggctgaggccagtcaggcggtgcctacccag
aaccagaagagattggatgggggagagggggaggaagtagaaggcagtaaggacagacag
acacctgccaaagaggtggaaaggaggagtgtgaacatcagtgttggagacactgaaagg
cctgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtggagatggg
gttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtggagatgga
gatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatggagacggggttgtaacccac
agtgttagtggagatggggcagtaacccacagtgttagtggagatggggttgtaacccac
agtgttagtggagatggggttgtaacccacagtgttagtggagatggagacggggttgta
acccacagtgttagtggagatggggcagtaacccacagtgttagtggagatggggttgta
acccacagtgttagtggagatggggttgtaacccacagtgttagtggagatggggttgta
acccacagtgttagtggagatggggacggggttgtaacccacagtgttagtggagatggg
gttgtaacccacagtgttagtggagatggggctgtaacccacagtgttagtggagatggg
gacggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggcagtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggttgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggggctgtaacccacagtgttagtggagatggggttgtaacccacagtgttagtgga
gatggagatggggctgtaacccacagtgttagtggagatggtgttgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatgggattgtaacccacagtgtt
agtggagatggggttgtaacccacagtgttagtggagatgggattgtaacccacagtgtt
agtggagatgggattgtaacccacagtgttagtggagacggggttgtaacccacagtgtt
agtggagatggagacgggcctgcagattgcagtgtctccaaacagaacagtgtaagaaac
agcagtgaaaccgtgggcggagccgtgaagaggacaagtatcgttgagactggcttcgac
cctctgtccattatagcagctgagatggagacagagggtgatggggacagtagcagtacc
tccacagcccgccgggacctggcagaagagatagagatgtacatgaaggttctgagccct
ctgagcagcaggaccgccagcgtggaccttcagaacccatccagcccgctactccacgcc
acctccaccccatctgaacactcctcccgccgacctcggcccctcagcctgacccactcc
ccctgtacctccccccgaccacctcctcccttgcttcgtgccaactcacacctccccctc
tccaggcccaaagaacgtctccgtccctcctccctggtctccccctcctccccaactctc
agtctggacatgtttaagagcagcttcctgtcagcagggaagggggtggctgagaaggcc
agcaggctctactcccgcctgtcatcacagacatcactctcacaggatgtgaactgcgac
cagatcagcgtgtcatcaatgacctcagtggacccagaatgcacctctctgttggaggag
ggctctgtcctggaccctgaaggtttcacctcctcctacgcctcgccccagcacgacagc
atcgcgtgcctgaggaggagcccagccaggggacgcctcgtctctcagagccccacctcg
ccctgcaaggtgttccgccacaactccttctctagtggtttggctcctccatctagaggt
ccccagactccagactcttctcctgatgcctcccgcttctacctccgtcaccactacact
actgaggtgttgatgtctagctgctgtcgctgtcagacatgtgactgtctggtgtatgat
gaagagatcatggcaggatggacggctgatgactccaacctcaacaccacctgtcccttc
tgtggctcttccttcctgcccttccttactgtacacatcagggacctgagacacaggacc
agtgacgagagtcaccaacctttaggagaggacacggctgcctcagccaaccctgagact
gcagctggagcactgacaccccagtcaaccacagctccagcagcagagcaacaggacact
gagggtgtagctgggtgtccacaggaccctgtcccaggcacaacttcagatccaatctca
gccccatctccaacctcagccccacctccaacctctcccccacctccagcctctccccca
tcccctgcctcaactacaactcgtagttccccagtgagtagttctccaaccccaacccca
tccccatctcccccagccccggtgacggttccctacctgagtcccttggttctgtggaaa
gagctagagtctctgctgggtaatgagggggaccaggtgatcagttctcccagcatcgtg
gaccagcaccctatcgtattctggaacctggtgtggtgctaccgcagactggaactcccc
tctcatctgcccggtctcatactgacctcacagcactgcagccagggacacgtatcgcag
gtcccagcccagagcgtgtcttcagaggacagtaaacatgtcctggttcgcatcctgtgg
gacaacccgtcactccaccaggactctgtccaggccctatacatgctctggcacgcacac
ttctctctcccctcagccagtggaacggtgtatgaggagggccagccccaggaccatctc
ttctcctctgaggtcctacaggttgcagtgaggaacatccagaagggggatgtctaccag
cccatgagtcagatcctacagctgctgggaccagagctgggcttcaacagacagaggagt
ctgtacagagatctcctcttcctggcgttgaccgctctggggaagagcaacatcaatatt
gatgcgtttgatcgtgagtacaaggttgcttacgaccgcctcagccccagccaagtgaag
ctgacacacaactgtgaccggcccccgggagcaggagtcatggaatgtagaaggatgttc
gggaaacccattctgtga
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integrated database retrieval system