Oncorhynchus mykiss (rainbow trout): 110522700
Help
Entry
110522700 CDS
T07259
Name
(RefSeq) plakophilin-3
KO
K28841
plakophilin 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382
Cornified envelope formation
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110522700
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110522700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
KAP
WRM1_C
Atx10homo_assoc
BAR1_C
Motif
Other DBs
NCBI-GeneID:
110522700
NCBI-ProteinID:
XP_036824708
UniProt:
A0A8C7LQ43
LinkDB
All DBs
Position
30:5473255..5529901
Genome browser
AA seq
885 aa
AA seq
DB search
MSFGAQDHVFLSALQPNTAVSTYAVPSEIQLEGKGGNLSDEMTRAKRVQQQVAMRLAEKT
STLSRQNGSATHYTSSEHSGSSTMKYQTFNPGFSSKSYVYTASRPVMAPRMSHYSGGFSS
RSAMDLSGGQRLSMGGGGGGGGGYQYHDNMSLSGGYHGGGGYQAGGGAMRQQMSTVNRAM
SRAPGPDLETMSLRSVRLQNMPAQPSPVAAWVDADGSDGVSLVSDHDATFNRQQSVYSTV
NGGAYSSGTQMRQAGGGGSMAYQAPMRMGGEEMMSVQQQHSFKGPAFRTISRINNRNNRM
SMGSMSGASTLPPGGSSYGSGGGNFVMSGASTLPPGGSSYGSGGGFMMGQMSSGSQGNLM
MQQQRQTTLPRTMSIKSMHSVGKGMDIYDGAMDMTGSMGNLSRINNLDMATAVRYLAEGD
AELQVLGAAFIQHECYSDTEAKKEVHRYKGIPELVRLFNSENQEVARYATGATRNLIYEN
MDNKVALIEGGGIPQLIEALKVNDDELRKNITGILWNLSSKDNLKEKLAKETLAELTERI
LIPLSGSGDTEVIRQSPSEVDIFYNTTGCLRNLSSVNEKTRRQMRETNGLVDALVGYIQA
SLQEGKVEEKGVENAVCVMRNLSYQLYSEIPPSAMLRLEGPTRGQDTSRSEAIGCFTPQS
KKVKNKMNQDLVTFTEVARVPKGLEWLWHPQVVGLYNRVLQGCEFNSTTREAAAGALQNI
TAGDKRWAGVLSRVALEQERMLPVMLDKLRTNNDLELRSLTGFLRNLSRHAKDKNAMATK
TVNNLVDKLPADGQQKEPSSDVVVNICGALNHLVTCSSVAARDITFFDGLQKLVAIKNSN
DSSPGKLKAAKAAATVLCNMFQYKKLHKDYKQKGFTRPDFADMTI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcggggctcaagatcatgtctttctgtctgctttgcagcccaataccgccgtc
agtacttacgcggtcccgtccgagatccaactcgaggggaaagggggtaacctgtcggat
gagatgacccgggccaagcgggtccagcagcaggttgctatgcggctcgccgagaaaacc
tcgacgctttcacgacagaacggctcagccacacactatacctcctcagaacacagcggt
tcttcaacaatgaagtaccagaccttcaacccagggttcagctctaagtcctacgtctac
acagcctccagacctgtcatggcacccaggatgtctcactactctggtggtttctcctcc
cgctcggcgatggacctgagtggtggtcagaggctcagcatggggggtggaggaggagga
ggaggagggtaccagtaccacgataacatgagcctgagcgggggctaccatgggggaggg
ggctaccaggctggcggaggggccatgaggcaacagatgtccaccgtgaaccgggcgatg
agccgtgctcccggcccagacctagagaccatgtccctgcgttccgttaggctccagaac
atgcccgctcagccgtccccagtggcagcctgggtagatgcggatggcagcgatggggtc
agcctcgtctcggaccacgatgccacattcaaccgccagcagtctgtctacagcaccgtc
aatggaggagcctacagctctgggacccagatgagacaggcaggaggaggagggtccatg
gcctaccaagcccccatgaggatggggggagaggagatgatgtcggtccagcagcaacat
tcctttaaagggccagcgtttcgcaccatcagcaggatcaacaacaggaacaacaggatg
tccatgggctccatgtctggggcttccaccctcccccctgggggaagtagctacggcagt
ggagggggaaacttcgtcatgtctggggcttccaccctcccccctgggggaagtagctac
ggcagtggaggaggattcatgatgggccagatgtcgtctgggtctcaggggaatctgatg
atgcagcaacagaggcagaccactctgcccaggaccatgtctatcaagagcatgcacagt
gttgggaagggcatggacatctacgacggagcgatggacatgacaggcagcatgggcaac
ctcagcaggatcaataacctggacatggctacggcggtgaggtacctggcagagggggat
gctgagctgcaggttctgggagcagcgtttatccaacatgagtgttacagcgacactgag
gccaagaaagaggtgcaccgctataagggcatcccagagctggtgaggctgttcaacagt
gagaaccaggaggtggctcgctacgccacgggcgccacgaggaacctcatctacgagaac
atggacaacaaggtggcccttatcgaggggggagggatcccacaactcatagaggctctg
aaggtgaatgacgacgagctacgcaagaacatcacaggtattctgtggaacctgtcatcc
aaagacaacctgaaggagaaactagccaaggagacgctagctgagctcacagagaggatc
ctgatcccgctctcaggcagtggagacactgaggtcatccggcagagcccctccgaggtt
gacatcttctacaacaccaccggatgtcttaggaacctgagctcagtgaatgagaagacc
agacgtcagatgcgggagaccaacggtctggtggatgccctggtaggatacatccaggcc
tcgctacaggaaggcaaggtggaggaaaagggagtggagaacgcagtgtgtgttatgagg
aacctctcctatcagctgtacagtgagatcccgccctcggccatgctacgtctggaagga
ccaaccagaggccaggacaccagcaggagtgaagccattggttgcttcacgcctcagagc
aagaaagtaaaaaataagatgaaccaggacctggttacattcacggaggtggcccgcgtg
cccaagggtctggagtggctgtggcacccccaggtggtggggctgtataaccgcgtgctg
cagggctgtgagttcaactccaccacccgcgaggctgcagccggggccctgcagaacatc
acagctggagacaagagatgggcgggggtgctgagtcgtgtggctctcgagcaagagagg
atgcttcctgtgatgttggacaaactgaggaccaataatgacctggagctgagatccctc
accggcttcctcagaaacctgtcacgccatgccaaggacaagaacgccatggcaaccaag
acagtgaacaacctggtggacaagctgcctgctgacggtcaacagaaggagccgtccagc
gacgtggtggtcaacatctgtggagcgttgaaccacctggtgacctgcagctccgtcgca
gcccgggacatcactttctttgacgggctgcaaaaactggtggccatcaagaactccaac
gacagcagtcctgggaagctgaaagcagccaaagcagcggccacagtcctctgcaacatg
ttccaatacaagaagctgcacaaggactacaaacagaaagggttcacacgaccagacttt
gcagacatgacaatctaa
DBGET
integrated database retrieval system