Oncorhynchus mykiss (rainbow trout): 110522733
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Entry
110522733 CDS
T07259
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110522733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110522733
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
110522733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
nSTAND1
AAA_29
AAA_23
CIS_TMP
DEAD
TraD_N
Motif
Other DBs
NCBI-GeneID:
110522733
NCBI-ProteinID:
XP_036824972
LinkDB
All DBs
Position
30:10322109..10458656
Genome browser
AA seq
1594 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDRGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHSVGLRQLRYCITGLLALLYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HRRPIDLKVIGKLPIAMRALTNYLKLCKAFESQRVKRPLGSMPQGPKWIWRALRQAFGRP
LIISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVL
AVLLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQIC
NLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVA
TKLSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRGKELTSLQTFAL
YTSISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVR
STVKALVSAQKLSEFFSSDEIGDEQEPNATMPTGPSNHKTIPSGPRNHNNKYQAVPLKVV
NRKRHPRDDWNNYRHEGGNPPPQEGDQDLCIRITSGYFTWTDGTPTLSNVNIKVPFGQLT
MIVGQVGCGKSSLLLAALGEMQRVSGTVTWNILPSLDSEGDDSPTSDKDAADDGDIQKRG
SVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGI
ILSGGQRQRIGVARALYQQTNVVLLDDPFSALDIHLSDHLMQEGIRKLLREEKRTVVLVT
HKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSDPKLFEQWKTLMHRQDGEFEKETVAESM
TVLERKNLRRAMYSKEASKTEEEHEEESVESEEDDSLSQAMRHRTTIPWRSCGVYLSSAG
LLLPLLLLSQLFKHTLMVAIDYWLAHWTSHVITAKMDATGRNCTVAQECGFSHSWYLSVF
SVLCCLGIVLCLVTSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGNILNRFSSD
TNTIDQHIPATLECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFIQKYFRVASRD
LQQLEDSTQLPLLSHFSETVEGLTTIRAFRYESRFRQRLLEYTDANNIASLFLTAANRWL
EVRMEYVGTCVVLIAAVASISNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQ
LGSVKRINGLLKTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLKQVNAH
ISPGQKVGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDDIDIAKLPLQTLRSRFSIILQD
PILFSGTIRFNLDPEMKATDDMLWEALEIAQLKPVVKTLPGGLDAMVTEGGENFSQGQRQ
LFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGIILEYDRPQALLEKEDSVFSAFVKADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcattctgtggaaacgagaacaactcgttggcatacaacgtggaccgcggc
gtcctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctctttgtcctggtctgtgagattgctgagggcatcgtctccgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaacatagagacctccaacttccccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagttcgccaagtacacggagcac
agcgttggcctgagacaactccgctactgcatcacaggactcctggccctgctctacgga
ctactactggctgtggagatcaatgtcatactgggaaggcgctacctgtgtttcactgag
gctacagaggtgaagcctccagaggacctgcaggacctgggggtgaggttcctgcagccc
tttgtcaacctgctgtccaaggccacctattggtggatgaacacattcatcacggcagcc
caccgccgccccatcgacctcaaggtcatcggcaagctgcctatcgctatgcgagccctc
accaactacctgaagctctgcaaggctttcgagagccagagggtaaagaggcctctgggc
tctatgccgcagggccctaagtggatttggagggccctacgccaggcgtttggacggccc
ctcatcatcagcatcaccttccgcttcctggctgaccttctgggcttcgctgggcccctc
tgtatctctggcatcgtccatcacatcagcaaggacaaccgcaccatacagcccccgata
aagctgctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgcta
gccgtgctgctgttcttcgccctcatcctgcagagaaccttcctccaggcctcgtattat
gtggctattgagaccggcattaatttacgaggggctatacagactaagatctacaataag
atcatgcggctgtgcacctccaacatgtccatgggagaactgaccgtaggacagatttgt
aacctggtggccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctg
tgggccatgccagtccagatcattgtgggggtgattctactctactacctcctgggaatc
agtgccttgatcggggccacagtcatcgctgtcctggcccctgtccagtactttgtggcc
accaagctgtcccaagcacagaagagcactctggagtactccagtgagcggttgaagaag
accaatgagttgctgcggggaatcaagctgctgaagctgtatgcctgggaacacatcttc
tgtcacagtgtggaggagaccaggggcaaggagctcaccagtctgcagacctttgcccta
tatacgtccatatctatattcatgaacgcagccatccctatcgcagctgtcctgaccacg
tttgtggtccatgtgcacatctctgaggaggctgacctgtcccctgctgtagcctttgcc
tccttgtccctgttccacatcctggtcactcctctcttcctgctctccagtgtggtacgg
tccacggtcaaggccctggtcagtgcccagaagctgagtgagttcttcagtagtgatgag
attggagatgagcaagagccaaatgctaccatgcccacgggccctagcaaccacaaaacc
attccctccggccccagaaaccacaacaacaagtaccaggcagtgcctctgaaggtggtg
aacaggaagagacatcccagggacgattggaacaactacagacatgagggaggcaaccca
cccccccaggagggagaccaagacctctgcatcaggataaccagtggatatttcacctgg
acagatgggactcccaccctgtctaacgtaaacatcaaggttccctttggtcagctgact
atgatcgtgggccaggtgggttgcgggaagtcgtccctgttgctggcagctctgggagaa
atgcagagagtctctgggactgtcacctggaacattttgcccagcctggactcagaggga
gatgacagccccacatcagacaaagatgctgctgatgatggagatatccagaagagaggc
tctgtggcctacgcttcccagaagccctggctgctcaatgcgacgctagtggagaacatt
accttcgaaatgcccatgatcaaacccaggtacaaggctgtcattgaggcgtgttccctg
cagccggatattgacatcctgccacagggagaccagacggagattggagagaggggtata
attctgtcaggagggcaacgccagcgtataggtgtagccagagccctgtaccaacagacc
aatgtggtcttactggatgacccgttctcagcgctggacattcacctgagtgaccacctg
atgcaggagggcatccgcaaactgctgagagaagagaagaggaccgtggtgctggtcact
cacaaactacagtacctaccacatgctgactggatcatagcgatgaaggacggcaccatt
cagaccgaggggactctaaaagacatccagaactctgatcctaagctgtttgaacagtgg
aagaccctgatgcaccggcaggacggggagtttgagaaggagacagtggctgagagtatg
acggtgttggagcgtaagaacctgcggagggcgatgtactccaaggaagcttccaagact
gaggaggagcacgaagaagagtctgtggaaagtgaggaggatgacagcctgtcccaggcc
atgcgtcaccgcaccaccatcccctggcgctcctgtggggtctacctgtcctctgcaggg
ctcctcctgccgctgctcctcctatcacagctcttcaaacacaccctcatggttgccatc
gactactggctggcccactggacctcccacgtcatcactgccaagatggacgccaccggg
agaaactgcaccgtcgctcaggagtgtggtttcagccactcgtggtacctgtcagtgttc
agtgtgctgtgctgtctgggcatcgttctgtgtctggtcacctctgtggctgtagagtgg
acaggcctgagagtggccaaagaactacaccacaacctgctcagcaagatcatactggca
cctatgaggctgtttgagaccactcccctgggtaacatcctcaacaggttctcctctgac
accaacaccatagaccagcacatccctgccaccctggagtgtctgagtcgctccaccctg
ctgtgtgtgtcggcgctgggggttatctcctatgtgacccctgtgttcctcattgccctg
gtgcccctggccatcgcctgctacttcatacagaagtacttccgggttgcctccagggac
ctccagcagttggaggatagtacccagctccctctcctgtcccacttctcagagacagtg
gagggcctcaccaccatccgggcattcaggtacgagtccaggttcagacagaggttattg
gagtatactgatgccaacaacatcgcatctctcttcctcacagcagccaatcgctggtta
gaggtccgcatggagtatgtaggaacctgtgttgttctgatagcagccgtggcctccatc
agcaactctctgtacaaccacctctccactggcctggtgggactaggactcacctacgca
ctcatggtatccaactacctgaactggatggtgcggaacctggcagacatggaggttcag
ctgggttcagtcaagaggatcaacggcctgctgaagactgagcctgagaactacgaggga
ctgatggctgcatctcaggtgccggatggctggccacggcaaggagagattcagatccag
aacctgagtgtgcgttacgacaccaccctgaaacctgtcctcaaacaagtcaacgcacac
atcagccctggacagaaggtggggatctgtggtaggacaggaagtgggaagtcttctttc
tccttggccttcttccgcatggtcgacacgttcgaggggcgtatcatcatagatgacatt
gacatcgccaagctgcctctgcagactctgaggtctagattctccatcatcctccaggac
cccatcttattcagcggaaccatccggtttaacctggacccagagatgaaggctacagac
gatatgctgtgggaggctctggagatcgctcagctcaaacctgtagtcaagactttacca
ggaggactggacgccatggtgacggagggaggggagaacttcagccagggccagagacag
ctcttctgcctggccagagccttcgtcaggaagtctagcatcctcatcatggacgaagcc
acagcctctatagacatggccacggagagcatccttcagaaggtggtgatgactgccttc
gctgacagaacagtggttaccatagcacatcgtgtccacaccatcctgaatgcagacctg
gtgatagtgatgaagagagggatcattctagaatacgacagaccccaggcactgctggag
aaagaggacagcgtcttttcagcattcgtcaaggcggacaagtga
DBGET
integrated database retrieval system
