Oncorhynchus mykiss (rainbow trout): 110522741
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Entry
110522741 CDS
T07259
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110522741
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110522741
04261 Adrenergic signaling in cardiomyocytes
110522741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110522741
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110522741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA
VWA_2
MCP-like_PDC_1
dCache_2
CobT_C
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110522741
NCBI-ProteinID:
XP_036824476
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All DBs
Position
30:13582717..13650727
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AA seq
1046 aa
AA seq
DB search
MSTKSKLKDVESIIKIVDIDGRDQVRDFAEDMERMLGSKMKSVKRLAESAEDADLYHDFN
KTLEFDYYNSMLVNTADEDGNFIELGGEFPLEKNKHFNNLPVNTLQSDVQVPTNVYNKDA
YILNGIYWSEALNDVFMNNFQKDPTLTWQYFGSSSGFFRIYPGIKWTPDSNGVAAFDCRN
RNWYIQAATSPKDIIIVVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRY
VEPCFKGTLVQADLDNREHFKVLVDELHVKGEGKVAKAMKESFKILNEAATKGQGSLCNQ
AIMLITDGAMEDFKDVFEEFNWPDRRVRLFTYLIGREMTFADNTKWIACNNKGYYTHIST
LADVQENVMEYLHVLSRPMVINHNHDIIWTEAYMDTVLFATKAQSLLLMTTVAMPVFSKK
KETLSHGILLGVVGSDIPLLEVMKLAPRYRLGPHGYAFLITNNGYILAHPDLRPLYKEGK
TLKPKPNYNSVDLAEVEWEDIDEILRTAMVKGEMGTLSLNVRASVDKAKRPLFLTNDYFY
TTINDTPFSFGMVLTRGHGQLMFMGTVSVEEGLHDLTSPDLSISNEWTYCETDIDPHHRK
YSQLQAVIRYLQGKEPDLECDEVLLQQTLFDAVVTAPLESYWQAIMLNASGMEMGVETAF
LGTRSGLIRLTRYTGIETRVAKKFLTPADKDNLFTVDHFPLWYRLAMENPPGRFIYYIPV
EDKDNRDKTGVSKYVIAATAVTVSSGGKMAMAGAIGVQMSLEMLEKRLWTIAFQPADTDC
TDVEGVCPLSCQSTDVNCFLVDSNGFIIVSKERSEVGRFFGEVDGSVMAALIKSGMYKKV
SLYDYQGMCRSGHSHSSSARPLLSPFYGLAAVIKWFFSHMLMFLLEFNFCGLWHSDYVVD
AKAGYHTSHKAKRTDALQPCDTEYPGFMLDNSIKETNSLLKCGRCQKMFVVQAVPDSNLV
LMVVQADCDCSRQYSSITLEPKEVKYNASVKCNRMKSQKVRRRPKSCHAYHPKENAKDCG
GASEISLSVALFLASLATSLALRRWT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaagtcaaaactcaaagatgtggaatccatcattaagatagtggacatcgat
gggagagatcaagtgagggactttgcagaggacatggagagaatgctggggtccaagatg
aagtcagttaagaggttggctgagtctgcggaggatgcagatttgtaccacgacttcaac
aaaacgctagagtttgactactataactccatgctggtgaacacagcagatgaagatggt
aacttcatagagctgggtggtgagtttcctctggagaagaataagcatttcaacaacctg
ccagtcaacacactgcagagtgacgtacaggttccaaccaacgtctacaacaaagatgcc
tacatcctcaatggaatctactggtcggaggctctgaatgacgtgttcatgaacaacttc
cagaaagaccccaccctcacctggcagtactttggcagctcctcgggattcttcagaatc
taccctggtatcaaatggactccagattcgaatggtgtggctgcgtttgactgcaggaac
cgtaactggtatatccaggctgccacctcaccaaaggacattattatcgtggtggacatc
agtggcagtatgaagggtctgaagatgaccatcgccaagcacaccatcaacaccatcctg
gacacactgggggagaacgactttgtcaacgtcatcgcttacactgactacgtgcgctac
gtagagccatgcttcaaaggcaccctggtgcaggctgacttggacaaccgcgagcatttt
aaggtgctagtggatgagcttcacgtgaagggagagggaaaagttgcaaaggccatgaaa
gaatccttcaaaatcctgaatgaggctgcgaccaagggccagggcagcctgtgtaaccag
gcgatcatgctgatcacagatggagccatggaggatttcaaagacgtgtttgaagagttc
aactggcctgatcgcagggtgcgcctcttcacttaccttattggcagagagatgaccttt
gcggacaacaccaagtggatcgcctgcaacaacaagggttactacacacacatctccact
ctggctgacgtgcaggagaatgtcatggagtatcttcacgtcctgagccgaccaatggtc
atcaatcacaatcatgacatcatctggaccgaggcttacatggacactgtgctcttcgcc
acaaaggctcaaagtttacttctcatgaccacagtggcaatgcctgtcttcagcaagaag
aaagagacgctgagccatgggatcctgctgggggtggtgggttctgacatccccctgttg
gaggtaatgaagctggctcccagatataggctgggtccccatggttacgctttcctcatc
accaacaatgggtacatcctggcacaccctgacctacgacctctgtacaaagaaggtaag
acgctgaagcccaagcctaactacaacagtgtggacctggctgaggtggagtgggaggac
atagatgagatactaaggacagccatggtgaaaggggagatgggcactctgtctttaaac
gtgagagcatcagtggacaaagcgaaaaggcctttgttcttaacaaatgactatttctac
acaaccatcaacgacaccccattcagttttggtatggttctgacaaggggtcacggacag
ctgatgttcatggggacagtctctgtggaagagggcctgcatgacctgacgtcccctgat
ctatccatatccaatgagtggacgtattgtgagacagacattgatcctcaccaccgcaaa
tactctcagcttcaggctgtcattcgctacctgcaggggaaggagcctgacctggagtgt
gacgaggtgctgctgcagcagactctgtttgatgccgtagtgacagcccccttagaatcc
tactggcaggccatcatgctcaatgcatctgggatggagatgggtgtggagacagccttt
ctgggaacccgctctggccttatccggcttaccagatacactggcatagagaccagggtc
gccaaaaagttcttgactccagctgataaggacaacctgtttaccgtggaccatttcccc
ctgtggtaccgcctggccatggagaacccccctggacgcttcatctactacatccctgtg
gaggacaaagacaacagagacaagacaggggtgtcaaagtatgtcatagccgccacagct
gtgactgtgtcatcgggaggcaagatggccatggctggagccattggggtgcagatgtcc
ttggagatgctggagaagaggctatggaccattgcctttcagcccgctgacacagactgt
actgacgtggaaggtgtctgccctctcagctgccagagcactgatgtcaactgtttcctt
gtggacagcaacggcttcatcatagtctctaaagagaggtcagaggtcggacgtttcttt
ggggaagtggacgggtctgtgatggcagcgttgattaagtcgggcatgtacaagaaggtg
tcgttgtatgactaccagggaatgtgcagatcaggacacagtcattccagtagtgctcgc
cctctgctcagccctttctatggccttgctgcagtgattaaatggttcttctctcacatg
ttgatgttcttactggagttcaacttctgtgggctgtggcactcggattacgttgtagac
gccaaggctggctaccatacatcccataaagcaaagaggacggacgcgttgcagccctgt
gacacagagtaccctggcttcatgttagacaactccatcaaagagaccaacagcctcctc
aaatgtggacgctgtcagaagatgtttgtggtgcaggcagtccctgacagtaacctggtg
ttgatggtggttcaggcggactgtgactgctcccggcagtactcctccatcactctggag
cccaaagaggtcaaatacaacgcatcagtcaagtgtaacaggatgaaatctcagaaagtc
cggcggcgcccaaagtcctgccatgcctaccatcctaaggaaaatgccaaggactgtgga
ggagcgtcagagatcagcctatcggtggcgctcttcttggcttctctggctacctcattg
gccctgcgcagatggacttaa
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