Oncorhynchus mykiss (rainbow trout): 110522805
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Entry
110522805 CDS
T07259
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110522805
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110522805
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
LMBR1
Phage_H_T_join_2
FlaF
Fez1
Spc29
Motif
Other DBs
NCBI-GeneID:
110522805
NCBI-ProteinID:
XP_021456927
Ensembl:
ENSOMYG00000045939
UniProt:
A0A8C7UNY1
LinkDB
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Position
1:41013294..41088082
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AA seq
1005 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKSMDYSNSLFDCQSPTSPFLGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLEMCLDEHREKLNATEEMLQQELLCRTTLETQKLDLKAEVS
NLKLKLNSFEKDILHFDFRDSEDMGLEINELRYKVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRNEHKLQALKEELVTLRRQLEGRDREMRRLHGETGFRANTPGGMDC
GDRVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLQRYKKVQDMV
MSVQEKKDKTKDGESDESNSDNSLSVMSTTTTPIALVSERHALAGVEEVAAKSPDELETH
YGATEVPSATTRPTVQSACAQSVPELNQAEPERTLRVPKSASQENLYVSNSEKITLVIDE
KPTENKAVEDIDKISERPPKSPSSSRPEDDSFGTKKARSSFGRGFFKIKGGKRTASTPNL
AETVREGGTDHLDLAGLPQRSAISDSTNTLTSVTSTTSPEGKKKSRGIKALFGKLRRSQS
TTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNIDLDTPFARWSKEQVCDWLQE
QGLGLYLNMAHVWISSGQTLLQASQQDLERELGIKHPLHRKKLQLALQALGSEEDDNKGK
LDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQV
LRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLM
VLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQDYLENPDYTLLTATA
KVKLRKMTFGSFGSLRKKRQDESEEYVCPMDVEMPKGRSFQKGYELYEDDLDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagctttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacagcctgtttgactgccagtcaccaacctct
cccttcttgggaagcctgcgggcactgcacctgctggaggacctccggggcgtgctggag
ctgatggacaccgaggagagggagggccttcgctgccagatccctgatgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggccaccacatttccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gaaatgtgtctggatgaacaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgactctagagactcagaaactggacctaaaggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacatactgcactttgacttcagggac
agtgaggacatgggtctggagattaatgagctgaggtacaaagtgactgagatggagagt
gaaagactacagtatgaaaagaaactgaaatccactaagtcgctaatggccaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgagaaacagaggaacgagcacaaactg
caggcactgaaggaggagctggtgacgctgaggaggcagctggagggaagggacagagag
atgaggaggttacacggcgagactgggttcagagccaacaccccgggtggcatggactgt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagctaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgcagcgctacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgatgagagtaacagc
gacaactccctctctgtgatgtcaacgacaaccaccccaattgccctggtgtcggagagg
cacgcgctagctggagtcgaggaagtagcagcgaagagcccagacgagctggagacgcac
tatggagctactgaagtgccttcggcaacaacccgccctacagtccagtcagcctgcgct
cagagcgtgccagagcttaaccaagctgaacctgagaggaccctgcgtgtcccaaagtca
gcgagtcaggaaaacttgtatgtcagcaacagtgaaaagattacattggtgattgacgaa
aagccaacagagaataaggctgtggaggacatcgataagatcagcgagcgcccgcccaag
tctccctcttcatctcgcccagaggacgacagcttcggtaccaagaaggctcgctcctcc
tttggccgaggcttcttcaagatcaaggggggcaagaggacagccagcacccctaacctg
gctgagaccgtgcgagaggggggcactgaccatctggacctggccgggctaccccagagg
tcagccatcagcgacagcaccaacacactgaccagtgtgacctccactacctctcccgag
ggcaagaagaagtccaggggaatcaaggcactctttggaaagctgaggagaagtcagtcc
accacgttcaacctggatgacaacctatcagagccggttgagttcaagaggggcggagtc
cgggccacagcaggacccagactgggatggtcccgggacctacagcaatcacccaacatt
gacttggacaccccgtttgcccgctggtccaaggagcaggtgtgtgactggctgcaggag
cagggactggggctctacctgaacatggcccacgtgtggatctcttctggacagactctg
ctgcaggcctcacagcaagatctagagagggagctgggcatcaaacaccctctgcacagg
aagaagctccaactggccctgcaggctctgggctctgaggaggatgacaataagggcaaa
ctggactacaactgggtgaccagatggctggatgacattggcctgcctcagtataagacc
cagttcgatgaagggagggtggacggccgcatgctgcactatatgacagtagatgacctg
ttgtctctgaaggtgggcagtgtgctccaccacctcagcatcaaaagagccatccaggtg
ctacgcctcaacaactacgagcccaactgcctgcgccgacggccctccgatgagaacaat
atcacaccagcagagatctcccagtggaccaatcacagagtaatggagtggctgagatca
gtagacctggcggagtacgcccccaacctgaggggcagcggcgtgcacgggggactcatg
gtgctggagcctcggttcaatgtggagaccatggcccttctgctgaacattccccccaac
aagaccctgctgcggaggcacctggccacccacttcaacctgctggtgggatctgaggcc
caggggctcaaacaggattatctagagaaccccgactacaccctgcttacagccaccgcc
aaggtcaagctgaggaagatgacgtttgggagctttggcagcctgagaaagaagaggcag
gatgagagtgaggagtatgtctgccccatggacgtggagatgccaaagggacgtagcttc
caaaaaggctatgagctctacgaggacgatctggaccggctagaacagatggaggactcc
gagggaactgtgaggcagattggagccttctctgagggcatccaaaacttgacgagcatg
ctgaaagatgatgaattcttcaaagagatctctaactctcccaaccccagcgtaacagat
gacgattccaacatttga
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