Oncorhynchus mykiss (rainbow trout): 110522810
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Entry
110522810 CDS
T07259
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110522810
Transcription factors [BR:
omy03000
]
Eukaryotic type
Other basic domains
RF-X
110522810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
110522810
NCBI-ProteinID:
XP_021456958
Ensembl:
ENSOMYG00000046391
UniProt:
A0A8C7WIC7
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All DBs
Position
1:complement(41188896..41218768)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRCSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEGYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEQEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPAAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSSGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGTPRLHPTPVTPRWADVSPANSCYTSPPIHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagaacgagagcaagcggtgttccagccacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccacattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaagactgggg
accaggggacagtcaaagtaccactattatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtattccaagaagggggcggcgtgggtgaacgagactggcaagaaggag
gtcaccaagcaaacagtggcgtattcaccacgctccaaactggggacgctcctgccagac
tttccaaatgtcaaagacctaaatctgcccgccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctgggctcctccactgtggtcaacattgtgggcgtctgtgactccatcctctat
aaggcaatctctggggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggttatccggaagtttgccaaacaactggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcatcatccacttg
taccaggagtttgaccgtcttttggaggagcagtctcctatagagggctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgcttatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgccgagctttggctcgttccacctgatccacctgatgttt
gatgactatgtgctgtacctactggagtccctgcactgccaggagagggctaacgagctc
atgaggtccatgaaggcagagggcaacacagctgagcaagaggaagagatgatgctgacg
gagaccacgcccacatccacgtccccagggcctttctccccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccgctgctgcccagtccccagagtacacaggggcc
acagccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaagcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctccgcccatcgactgccagtctacgcacaccgggatgagcacggg
ttcactgggagctataactacggaagctactccaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggcattcctgcccccctccattatcccgcctac
caccgcacttctgcacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcctgtgaccccccggtgggctgatgtctca
ccggccaacagctgttacaccagtccccctatacactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtatgaacactctcaacacttt
cccggtttcgcctacatcaacggagaggccactacaggctgggccaagtag
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