Oncorhynchus mykiss (rainbow trout): 110522814
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Entry
110522814 CDS
T07259
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110522814 (arhgef28a)
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110522814 (arhgef28a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
LMBR1
Motif
Other DBs
NCBI-GeneID:
110522814
NCBI-ProteinID:
XP_036832880
LinkDB
All DBs
Position
5:18067350..18177035
Genome browser
AA seq
1806 aa
AA seq
DB search
MELNRGEVPLYGQVEVRAVLQVPDLDREPEQTEFYVVLEGSRLAHVAVVKRAEDGESLCF
TVPGHDLQETASVTVYRHTEDGAKPCGGGASLRYVCDLPQEVAEYLLANSDSLSPQSHLE
VLRRVSAAPGEGDMEGDMSAGPGKEHSLGQTEQEEEGVRGGRPRPDPLIECHLREMDERI
TQAVANLNYPLEWSGKASQPREELLPREALLHLSVRLGLLHLSRFLIGQPMGQRALTMPN
EEGETPLQLAQRRGDHSLFMALATSPFPQRSPLVGVWCVWADSTRVLRFCPGSDCLSLTF
LGGPESSVLGNILVLREKLMDHNILRQISALRGDVQMEDSYGLDVHRSDASDGGLGRGLP
VRYLTLVDSVFEDQLVLSLDDDEELPTLQTVKSKTTHPRGTQRQFSHSAAADTLASIING
RSQLDTEVDDLRANVSVAGITRDSSVTVSRVWDSVASECLLQATSTPLPPLGLEEQQSPS
VSHSPAPSPSPADRALARLNSNSHSYLTNQRGSPPLESPDLSPSLVALVMDSEGDEEGFL
VKSSLSPISPLTSDPRSSGDETSPDLTCTRTHSASSDGDPPLAKDMGNQGIRHRSYSYSS
PKISLLPPRFSCKTLATPATSDLSPEQRTFSLSEQPLEKRELRFRKRAQSADDEGSVELA
ESIQHLTLSEFLKEIEEEEWDKYNIPSKVESEKYKVIRTFSFLKSRMSTTRNKNKGKGKE
KEREKGKEKEREKEGTDKDKQQNGHRFSTGSCAGPTVCLVCDKPATGKDLLHCSCCTVMV
HKGCKDSAPPCLKKLQDKYAVTMVKNRTASLPQNFTVRDSPSPCPISTSASLPMMSQRDK
RETASLPNPLSRSVPSATDRLSESPEAESDSRWCPGQSEELLQTTESSTSTDSSVGEVCP
STPQVDCVDASLHGDLDADALDYEAESWSLTVEHTFCKKQDKRVVKRQDVIYELMQTEMH
HLQTLRIMAEVFRRGMREEVQLDAGALDRVFPCLDDLLLLHHNLFNAMRERRHSSAKPHG
DRNYVIVRIGDILLQQFSEDSAERMKQVYGEFCSHHTEAVTFFKELQQHNKRFQTFIKQQ
SNNYLVRRREIPECILLVTQRITKYPVLLERILQYTQVDSEEHMDLSRALVLIKEVIAAV
DLMVSEFEQGQRLQDVLNRMENRSFAKLKNGHTFRKQDVLGPGQTLKHQGLLLWKTATGR
LKDVLALLLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAA
GPEMYEVHTSSKDERNTWMRLIREAVESCPEEEEENTNESEEERRTAEARVQKIHKLQET
LSSQDYQICSSLEEKLQIYADLSVLRGEAPQEPHPEPHLLVQPNPEEVPQAAVLLTAALR
EAENLRTTLSSLTFSPFSPCSPPRDPLSHPVSPACPPNPLDTPSDAEASLGDPNTMDGES
ASQVLVLQSLTNNINLKVSHSVQSLTQLLYSLQAAVTIQDSFYEVQKFLLHERDRHSPRS
PRPHTPCLRGNALQEQEKQRNLEKRREEVAAAVRLQGRLHQERQRWERECQARHSQQGEL
ESRLEERERQCHLEAERLKQEREELEEQLEEYQQSLERLRESQRSVEKERERLETQQNLL
QSWRHSRQRSLPVMVIPLDRCHQDSLPCQPGGHLDNGGSVFVNEAAVTTAMGLNNRHVHH
HLQQQRGYGDDPRAHNSLNTLLARSSHGQTLQLHPDTHTPQDWAGGTGVTGYLYTPTEGQ
GSEQKPNDINTHRKVRETWSLMATAAGQYQGVPPHGDPQLDLSLLVPLETERGDGEDVGE
ENIVYL
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagaggagaagtacctctatatggccaggtggaggtccgtgctgtgtta
caggttccagatctggacagggaaccagaacagacagagttctatgtggttctagaaggt
tccagactagcccatgttgctgtagttaagagagcggaggatggagagtctctttgcttc
acagttcctggtcacgacctccaagagaccgcctctgtcacagtgtatcgtcacacagag
gacggagccaagccttgtggaggcggggcctccctgaggtacgtctgtgatttgccacag
gaagtggccgagtacctgctagccaacagcgactctttgagtccccagagccacctggag
gttctgaggagggtctcagcagctccaggggagggggacatggagggtgacatgagcgcc
ggtccaggaaaggagcactctctggggcagacagagcaggaggaggagggggttagaggt
gggagacccagacctgatccactgatagagtgtcatctcagggagatggatgagaggata
acccaggccgtggctaacctgaactaccctttggagtggagcggcaaggccagccaacct
agagaagagctcctgcccagggaggctctcctccacctttcagtgcgtctgggtttgctc
catctctcccgctttctaattggccagcctatgggtcagagggcactgaccatgcccaat
gaggagggggaaacacccctccagctggctcagaggagaggagaccactccctctttatg
gcactcgctacttcacctttccctcagaggtctccccttgtcggggtgtggtgtgtatgg
gcagatagcacccgtgtactgaggttctgtcctggatctgactgcctctccctcaccttc
ctggggggccctgagagcagtgttctgggcaacatcctggtcctcagagagaaactgatg
gaccacaacatcctcagacagatctcagcactgagaggtgatgttcagatggaggacagt
tacggattggacgtccatagaagtgatgccagtgacggaggtctgggcagggggctgcca
gttagataccttactctggtggatagtgtttttgaagatcagcttgttctctctctggat
gatgatgaggagcttccaacgttacaaacagtaaagtccaagacgacccaccccagagga
acccagagacagttctctcactctgctgctgcagacacattagcctccatcatcaatggc
aggagtcagcttgacacagaggtggatgacctaagggctaatgtcagtgttgctgggata
acgagggacagctctgtgactgtcagcagggtgtgggactcggtggcctcagagtgcctg
ctccaggccacctccacccctctacctccattgggactagaggaacaacagtccccctcc
gtctctcactcccccgctccctcaccttcccccgctgaccgagccctcgcccgactcaac
agcaactcccactcttacctaaccaatcagagagggagcccgcctctggaatcccctgac
ctcagccccagtctggtagctctagtgatggacagtgagggagatgaggaggggttcctg
gtgaagtcttccctctctcccatctctcccctgacctctgaccctcgtagcagcggggac
gagacctccccagacctcacctgcacacgcacacactccgcgtcctcagacggcgacccc
cccctcgcaaaggatatgggcaaccaggggatcagacaccgctcctactcctactcctcc
cccaagatcagcctgctgcccccccgcttctcctgcaaaaccttagccacgcctgcgacc
tctgacctcagcccagaacagagaacattcagtctatcagagcagcctctcgaaaaaagg
gagttaaggtttcgtaagcgtgcccagtctgcagacgacgagggcagcgttgagctggca
gagtccattcaacacctcaccctctcagagttcctcaaagaaattgaagaggaggagtgg
gacaagtacaacatcccctccaaggtggagtcagagaaatacaaagtgattcgtaccttc
agcttcctcaagagcaggatgtccaccactcgcaacaagaacaagggaaaggggaaggag
aaggagagagagaaggggaaggagaaggagagagagaaggaagggacagataaggacaaa
cagcagaatggacatcgtttctccacgggttcctgtgctggtcccaccgtctgtctggtc
tgtgacaaacctgctactggcaaggaccttctgcactgctcctgttgtacagtcatggtc
cataagggttgtaaggactctgctcccccgtgtctaaagaaacttcaggataagtatgca
gttactatggtgaagaaccgaacagcatccctcccgcagaacttcacagtgcgagacagt
ccctctccatgtccgatatccacctcagcctctctacctatgatgagccagagggacaag
agggaaacagcctccctccccaaccctctctccaggagcgtcccttctgccacagacagg
cttagtgagagtccagaggcggagtctgacagcaggtggtgtcctggccaatcagaggag
cttctgcagaccaccgagtcgtccacgtccactgactcctccgtcggagaagtttgtcct
tccactccccaagtagactgtgtggacgctagtctccatggtgacctggatgctgatgct
ctggactacgaggctgagtcttggagtctgacagtggaacacacgttctgtaagaagcag
gacaaacgggtggtcaagagacaggatgttatctatgagttgatgcagacagagatgcac
cacctccagacactgaggatcatggctgaggtgtttcggcgagggatgagggaggaggtt
cagttggatgcgggtgccttggaccgtgtctttccttgtctggatgacctcctcctcctc
caccacaacctcttcaacgccatgagggaacgccgccacagctccgccaagccacatggg
gacaggaactacgtcatagtacgcatcggcgacatcctgttgcaacagttttctgaagac
agtgcagagaggatgaaacaggtgtatggagagttctgcagtcatcacactgaggcagtc
accttcttcaaagagttacagcagcacaacaaacgatttcagaccttcatcaagcaacaa
agtaataactatttggtccggaggagagagatcccagaatgcatcttgttggtgacccag
aggatcactaagtaccctgttctgctggagaggattctgcagtacactcaggtggacagt
gaggagcacatggacctttccagagctctggttctgatcaaggaagtgatcgcggcagtt
gacctgatggtcagtgagtttgagcagggtcagcggttacaggatgttctgaacaggatg
gagaatcggagctttgccaagctgaagaacgggcacaccttcagaaagcaggatgttctg
gggccaggccagaccctcaaacaccaaggcctgttactgtggaagaccgccactggacga
ctcaaagatgtcctggctctccttctgacagacacactgatcttcctccaggagaaagac
cagaagttcatattcgctgctgtggaccagaagcccccagtgatctctctccagaagctg
atcgtcagagaggtagccaatgaggagagagggatgtttctgatcagtgcgtcggccgca
gggccagagatgtacgaggtccacacttcctcgaaagacgaacgcaacacctggatgaga
ctaatcagagaggcagtagagagctgtccagaggaagaggaggagaacactaatgagtca
gaagaggagagaagaacagctgaggccagagtccagaagatacacaaactacaggagacc
ctatccagtcaggattatcagatatgctccagtctggaggagaagctacagatctatgct
gacctgtctgtcctgaggggcgaggccccccaggaaccacaccctgagccacacctactg
gtccagccaaacccagaggaggtgccccaggctgcagtactgcttactgccgcgctcaga
gaggctgagaacctgaggaccactctgtcctcgctgaccttttcccccttcagcccctgc
agccctcccagggaccccctgtcacaccctgtgtccccagcctgccctcctaaccccctg
gacaccccctcagatgcggaagcctctcttggggaccctaataccatggatggggagtca
gcctcccaagtccttgtactgcagtccctgactaataatatcaaccttaaggtgtcccac
agtgtccaaagcttgacccagttactctatagtctacaggcggcggtaaccatccaagac
agtttctacgaggttcagaagttcctcctccatgagcgtgaccgccactccccccgctct
ccgagaccacacaccccatgtctccgtggcaacgctctgcaggagcaggagaagcagcgt
aacctggagaagcgccgtgaggaggtggcggcagcggtacggctgcagggcaggctgcac
caggagagacagcggtgggagagggagtgccaggcgcgccacagccaacagggggagctg
gagagcaggctggaggagagggagagacagtgccacctggaggctgagaggctgaaacaa
gagcgggaagagctggaggagcagctggaggagtaccagcagagcctggagaggctgaga
gagagtcagaggagtgtggagaaggagagggagaggctggagacccagcagaacctgctg
cagagctggagacacagccgacagaggagcctgcctgtcatggtcatacccctggaccgc
tgtcatcaggactcacttccttgccagcctggaggccatcttgacaacggcggctcagtc
tttgtcaacgaggcagcggtcaccacggcaatggggctcaacaaccgccacgtgcaccac
cacctgcaacagcagagagggtacggagatgaccctcgagcccacaacagcctgaacacc
ctactggcccgctccagccacggacagacactccaactccaccctgacacacacacaccc
caggactgggcggggggcaccggtgtcaccgggtacctctacacacccacagagggacag
ggctctgagcagaaacccaacgatataaacacacaccgcaaagtgagggagacgtggtca
ttgatggcaacagcggctggacaatatcagggtgtacccccacatggagatccccaactg
gacctgtccttattggttcccctggagacggagcgtggggatggggaggacgtgggagag
gagaacattgtgtacctctga
DBGET
integrated database retrieval system
