Oncorhynchus mykiss (rainbow trout): 110522842
Help
Entry
110522842 CDS
T07259
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110522842
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110522842
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110522842
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
110522842
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
110522842
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Type II RPTP family
110522842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
Tc-R-P
PTP-SAK
V-set
DSPc
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
110522842
NCBI-ProteinID:
XP_036795567
LinkDB
All DBs
Position
1:complement(10220327..10622579)
Genome browser
AA seq
1937 aa
AA seq
DB search
MAAGGPPCLRLPALLPLSTLLLCMLLTGFHALSPPRFTKVPVDQIGVSGGVVSFVCQATG
DPKPRVSWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENIYECVAENSEGEVNV
NAKLSIIREDLLPGGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPIDPN
ASNGRIKQLRSEAFEGTPIRGALQIENSEETDQGKYECVASNVEGVRYSSPANLYVRELR
EVRRVPPRFSIPPTSHEMMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVL
ELNSVRESANYTCVAMSSLGIIEAVAQITVKSLPKPPGTPMVTETTATSVTITWDSGNPD
PVSYYIIQYRAKSPDSKFETMDGITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSEPVE
TRTGEQAPASPPRNIQARIISQNTMMVRWDEPEEPNGQIKGYRVYYTMDPSQPMSLWQIH
NVQDSIITTIQSLVASETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTKFQVGAVSD
TSMELTWEPAFQKEGIISFELRYKEGSFGSQVTKTFGPTASYVVEGLRANTEYYFSLAAI
SNKGIGAFTNEISQKTLQAKPSAPPQDVKCSSSSSTSLLVSWRPPPVESQNGALAGYLVR
YQVVGASVEGGSAGEPMEEPAVLPSDGKVLLQKLEKWTQYSVTLAAFTEIGPGPESEPLL
CRTDEDVPGAPPRRVEVEVLNSTALKVMWRSLLPGRQHGQIRGYQVHYVRVENGESRGLP
LIKDVMLADAQWETDDTAEYEMVIGGLQSDTTYSITVAAYTTKGDGARSKPKLVVTKGAV
PGPPSLSVAQDSETSAVVCWDAPDVMIPGMGLQGYRLQFGRKDVSPLASLEFTPQERQYT
VASVHRGATYLFKVQAKSRGGFGEEATAELQVPEHTPQGYPQIRESSNVTCCSVELSWSP
PVLAERNGDITEYTLAYQETGLGGTPRELSLPASQSTYVLNSLKPNSAYDVKIRAHTSVG
PGPYSPPIQYRTVAFETDVPKNFTVKWVTKTTVLLTWKFVERRFPFRCTIEYNRQKMDVD
ARLTKALVTSLRPNTTYEFRVTCQENTEGGPRHRVVARTTPPILVKKPKLDLYSEPDNIL
TMGFAPVETKDIKDFYVVAVPLKKGLGTARHLKNPDEMDLEELLRDITPKRRTRRQLSQA
DGKKPYITACFKQLPTSFTLGTEHRHSSCESKPLEPGQEYVFFLLAELNTTAVKMFAASP
YTDLVVTPELEADPLPMETGGDGLIWVVGPVLAVVFIICIVIAILLYKNSKPDSRKRKES
EPRTKCLLNNAEITPHHPTDPVEMRRINFQTTGMMSHPPIPIAELAEHTDLLKANDNLKL
SQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILAPIEGITGSDYINANYID
GYRKQNAYMATQGPLPETFGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETY
GMTQVTLLDTIELATFCVRTFSLHKVRNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFL
RRVKTCNPPDAGPIIAHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYM
VQTEDQYSFNHDALLEAVACGNTEVAARSLFSYIQKLAQVETGEHVTGMELEFKRLANSK
AHTSRFISANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINASFIDGYRQQKAYI
ATQGPLAETTEDFWRMMWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMA
EYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFG
QDGPISVHCSAGVGRTGVFTTLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQF
CYQAGLEYLGSFDHYAT
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggcggtccaccctgcctacgtctgccggccctgctgcccctcagcactctg
ttgctctgtatgctgcttactggcttccatgccttatcaccaccaagattcactaaagtt
cccgtagaccagattggcgtatctgggggtgtggtctcattcgtgtgccaggcgacagga
gaccctaagccccgggtgagctggaacaagaaggggaagaaagtcaactcccagcgcatt
gagactatagagttcgatgagggtgccggcgccgtccttcggatccagcctctacgagcg
ccgcgggacgagaacatctacgagtgcgtggcggaaaatagcgagggtgaggtcaacgtt
aacgccaagctgtccataatcagagaggacttgctccctggaggattccccaacatagac
atgggtccccagctgaaggtggtcgagcggacccggacggccaccatgctctgtgctgcc
agcggcaaccccgacccagaaatcacctggtttaaggactttctgcccatagaccccaac
gcaagtaacgggcgaatcaaacagctgcgctcagaagcctttgagggtacccccatccga
ggcgccctgcagattgagaacagcgaggaaacagaccaggggaagtacgagtgtgtggcg
tctaacgtggaaggcgtgcgttactcatcccctgctaacctatatgtgcgagagcttcga
gaagtccgccgtgtgccccctcgcttttctatcccgccgaccagtcacgagatgatgcca
ggtggcagtgtgaacatcacctgcgtggcggtagggtcgcccatgccgtacgtcaaatgg
atgctcaactccgaggacctaacgcccgaagacgagatgccagtgggtcggaatgttctg
gagctcaacagcgtgcgagagtctgccaactatacatgtgtggccatgagcagtctgggc
atcatcgaggcggtggcgcagatcaccgtcaagtccctgcccaagcctccaggcacccca
atggtgaccgagaccacggccaccagtgtcaccatcacctgggactcgggcaacccggac
ccagtgtcctattacatcatccagtaccgcgccaagtctcccgacagcaagtttgagacc
atggacggcatcaccactacgcgatacagcatcgggggcctctaccccaacacggagtac
gagatccgcgtctcggcctttaacaccatcggccagggtccccccagtgagccggtggag
acccggaccggggaacaagccccggccagtccgccccgcaacatccaggcccggatcatc
tcccagaacaccatgatggtgcgctgggacgagccagaggagcccaacggacagatcaaa
gggtaccgggtgtactacaccatggacccgtcccagcccatgagcctatggcagatccat
aatgtccaggatagcatcatcaccaccatccagagcctggtggcatctgagacctacacc
atccgtgtcctggcctttacctcggtgggcgacgggcccttctccgaccccatccacgtc
aaagtgctgcaaggagtccccggacagccaacaaagttccaggttggtgctgtgtccgac
acaagcatggagttgacctgggaacctgccttccagaaagaggggatcatcagctttgaa
ctccggtacaaagagggcagttttggtagccaggtgaccaaaacttttggccccactgct
tcgtacgtcgttgagggtctgcgggcgaacacggagtactacttctctctggctgccatt
tccaacaaaggcattggagccttcaccaacgaaatatcccagaaaaccttgcaagccaag
ccctcagccccccctcaagatgttaagtgcagcagctccagctccacctccctgctggta
agttggcgccccccgcctgtggagagccagaacggcgccctggcggggtacctagtgcgc
taccaggtggtgggagcctccgttgagggtggcagtgccggggagcccatggaggagcca
gccgtgctgcccagtgatgggaaggtgctgctgcagaagctggagaagtggacccagtac
agcgtcaccctggccgccttcactgagattgggccaggcccagagagcgagcccctgctc
tgccgcaccgacgaggatgttcccggagctcctcctaggcgggtcgaggtggaggtgctc
aactccacggcgctcaaggtcatgtggcgctccctgttgccggggcgacagcacggccag
atccgtggttaccaggtgcactatgtgcgtgtggagaacggggagtcgcgcggcctgccc
ctcatcaaggacgtcatgcttgccgatgcccagtgggaaacagacgatacagccgaatat
gaaatggtcatcggagggctacagtcggacaccacctactccatcacagtagctgcgtac
accacgaagggagatggagcacgcagcaaacccaaactggtggtaaccaaaggagcagtg
cctgggccaccctctctgtcggtggctcaggattcagagacgtcggccgtggtgtgctgg
gacgcacccgatgttatgatccctggcatggggctgcagggttaccggcttcagtttggc
cgcaaagacgtgtcccccctggctagtctggagttcaccccccaggagaggcagtacacg
gtggctagtgtccaccgcggtgccacctacctcttcaaagtccaggccaagagtcggggg
ggcttcggtgaggaggcgacagccgaactgcaggtgcccgaacacacaccccaggggtac
ccccaaatcagagaatcctccaacgtgacctgctgctcggtggaattgtcatggtcgccc
ccggtgctggcagagcgcaacggggatatcacagagtacacgctagcataccaggagacg
ggcttggggggcacgccccgggaactcagcctgcccgcaagccagtccacctacgtgctc
aacagcctcaaacccaactcggcgtacgacgtgaaaatacgcgcacacacgagtgtaggt
ccagggccctacagcccgccgatccagtatcggacagtggcgtttgagacagatgtacca
aagaacttcacggtgaagtgggtaaccaagacaacggtgttgctaacatggaagtttgtt
gagaggcggttcccatttcggtgcacgatcgagtacaaccgtcagaagatggacgtggat
gcccggctgaccaaggcgctggtcaccagcctgcggcccaacaccacctatgagttccgg
gtcacgtgtcaggagaacacagagggtggccctcgccaccgtgtagtcgctcggaccaca
ccgcccatcctggtcaagaagcccaagctggacctctactcggagccagacaacattctg
accatgggtttcgccccggtagagaccaaggacatcaaggacttctatgtggtggcggta
ccactaaagaagggtttggggactgcacgacatctcaagaacccagacgaaatggacttg
gaagagctgctgagggacatcaccccgaagcgtcgcaccaggcgtcagctgagccaggcg
gatggcaagaagccctacatcacagcctgcttcaagcagctccccacctcgttcaccctg
ggcacagagcaccgccacagcagctgtgagagtaaacctctggagcccgggcaggaatac
gtcttcttcctactggctgagctcaacaccaccgccgtgaaaatgtttgcggccagccca
tacacggacttagtggtgaccccagagctggaggctgatcctctgcccatggagacaggt
ggggacggcctcatctgggtggtggggcccgtcctggccgtagtcttcatcatctgcatc
gtcatcgccatccttctctacaagaacagcaaacctgacagccgcaaacgaaaggagtca
gagcccagaacaaaatgtctgctgaacaacgcagagatcaccccccaccaccccacagac
ccagtggagatgagacgcattaacttccagaccacaggtatgatgagtcatccccccatt
cctatcgcggagctggctgaacacacggatcttctcaaagccaacgacaacctgaaactc
tcccaggagtatgagtccatcgatccaggccagcagtttacgtgggaacactccaacctg
gaggtgaacaagcctaaaaaccgctacgccaacgtcattgcctacgaccactcccgcgtc
atcctcgcacccatcgaaggtattactggcagtgattatatcaacgccaactacatagac
ggctacaggaagcagaatgcctacatggctacgcagggcccgctgcccgagacgttcggg
gacttctggaggatggtgtgggaacagagggcagccactgtggtcatgatgaccagactg
gaagagaaatcacggatcaagtgtgaccagtactggcccagtcgaggcacagagacctat
ggtatgacccaggtgactctactggacaccatagagctggccaccttctgtgttcgcact
ttctccctgcacaaggtacgaaatggctccagtgagaaaagggaggtccgtcagttccag
ttcactgcgtggcccgaccacggggtccccgagtaccccacccccttcctggccttcctc
cgccgggtcaagacctgtaaccccccagacgcaggccccatcatcgcccactgcagtgcg
ggcgtgggtaggacgggctgcttcattgtgatcgatgccatgctggagcgtatcaagcat
gagaaaacagtggacatctacggccacgtgaccctgatgcgatcgcagcggaactacatg
gtgcagacggaggaccagtacagcttcaaccacgacgcgttgctggaggcggtggcgtgc
ggcaacacggaggtggcggccaggagcctgttctcctacatccagaagctggcccaggtg
gagacgggcgagcacgtcaccggcatggagctggagtttaagcgcctagccaactccaag
gcccatacgtccaggtttatcagtgccaacctgccctgcaacaagttcaagaaccgtctg
gtgaacatcatgccctatgagaccacccgcgtctgcctgcagccaatcaggggcctcgag
ggctcagactacattaacgccagcttcatcgacggatacaggcaacagaaggcctacatc
gcaacgcagggcccgttggcagagaccacagaggacttctggaggatgatgtgggagaac
aactccactattgtagtcatgctcaccaaactccgagagatgggcagggaaaagtgtcat
cagtactggcccgctgagcgttcggccaggtaccagtactttgtggtggaccccatggct
gagtacaacatgccccagtacatcctccgagagttcaaagtcaccgatgcaagggacggg
cagtccaggacagtgcggcagttccagttcactgattggccggaacagggggtgcccaag
tcaggagagggcttcatagacttcataggccaggtgcacaaaaccaaggagcagtttggc
caggacggacccatctctgtccactgcagtgccggggttggccggaccggtgtcttcacc
acactcagcatcgtgctggagaggatgcgctatgaaggcgtggtagacatctttcagacg
gtcaagatgctgcgaacacagaggccggccatggtccagacagaggatgaatatcagttt
tgctaccaggcgggtctggagtacctaggaagctttgatcactatgcaacgtaa
DBGET
integrated database retrieval system
