Oncorhynchus mykiss (rainbow trout): 110522917
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Entry
110522917 CDS
T07259
Symbol
tsc1b
Name
(RefSeq) TSC complex subunit 1b
KO
K07206
tuberous sclerosis 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
omy04150
mTOR signaling pathway
omy04218
Cellular senescence
omy04910
Insulin signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110522917 (tsc1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110522917 (tsc1b)
09143 Cell growth and death
04218 Cellular senescence
110522917 (tsc1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110522917 (tsc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110522917 (tsc1b)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
CCC_C_2nd_pro
Motif
Other DBs
NCBI-GeneID:
110522917
NCBI-ProteinID:
XP_036833203
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Position
5:33226370..33259075
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AA seq
1172 aa
AA seq
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MAREQPNVGDLLPLLESSDIRQLEEIKGLINEHLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNECMTKQACRLPTLTLLGHVVRKQPSWIHKIARYPLLLSLLKC
LKTDSDVVVLITGVLVLITLLPMIPQAGKQHLYEFFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMDTFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKRFEIHDIVIECAKVSLDPKEASCEEGYATMPENLYPQMQLCPQDSASSPYT
DFHSSFGSSSLTPLSAPRQPQPPPLSLPPLSGTQSSYRSPQTSRRQNSSCELNSTCGGKE
LWSPSSQCGMATPPSSRGMSPNPELSHSASYLSGHRVHSTSGGKGTPASSTPATTSPPPT
LSDEFPTIPLTSNTASPPRKHGCPVEASKPSLVRQEPIRDPEKDEEVINNRDASDGGTIS
MTLTELSVFMQEQELELQLRTEKEREEAAITEELLEITEDKRDLAALRGFDSPFYRTTET
LTGTQEKALPNHPLGGLMLPRDPHHAVSTPDKALENAQGANGGGDNSRGSALEQSWSFQP
MCPFSPIEHPLHRSPSAPEYEMAKFGGLFSPSPSIKNHSLPYEVLFDLALPRAASLFVGR
RTSEALGRAALERLCQRQEGLEDREEGQGRVSASPLEVLDRLVQQGSDAHDKVLNRLPLP
SKSADWTHFGGTAPLDELHTLRSQLLLLHSQLLYERYKREQHAVRNRRLLRRVINATALE
EQNNAMKDQLNLQSVDIMSLKESLQVEQQRCRQLWDDRETVVTRLHSQVRQLQQGRDDYY
TKNQELQSQLNEYQKKMNELEADLQRSNNKVCHTGHLLNQMTTKLSTSERTQQQMSFLNK
QLLLLGEAHKLAEQRQQHTGSDNAMEAQMVQVSWGKEVERLRQSLLQQGQKLEAAQQRVG
ELETQLTKKEHLIVEQKKFLEDVKGRAKGELQASDSRYQAQRRVTQLLQTELLQLYSRLE
MEGHATLTTPSAGGSSTDPGPPIDSSIMEPDGPVTSGTNEWSDNGRPPQSPRRNGSTLSP
GQPMANNPPKKLPVNSVNGTQEVPKPLLVEPSCTHAPPLPPDATPLTVGSYPSAKSFLGM
RARELFRNKSESQCDEEPPPPPPGRPFTGPED
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggccagagagcagcccaacgttggggacctcctccctctcctggagtcctctgacata
cgccaactggaggagatcaaaggccttatcaatgagcacctcagcactgagcgggggtca
atgctgctgaatggactggtggactacttcttggagactaactcggcccaggccatgcat
atcctctcgtcagtcagagagccacatgataagcacctgctggacaagatgaacgagtgt
atgaccaaacaggcctgccggctgcccaccctcactctgcttggccacgtagtccgcaag
cagccgtcctggatccataagatcgcccgctacccgctgctgctctcgctgctcaaatgc
ctcaagacggattcagacgttgtggtcctcataactggagtcctggtgttgatcactctg
ctacccatgatcccccaggctggcaaacaacacctgtatgagttctttgacatctttgga
cgcctggcttcctggaacctgaagaacccaggccacgtctccgaggtatacctcatccac
ctgcacgccagcgtctactcgctcttccaccgcctctacggcatgtacccctgcaacttt
gtgtcctacctgcgctcccactacagcatgaaggagaacatggacacctttgaggaagtg
gtgaagccaatgctggaacacgtccgtatacacccggaactagtgactggaactaaggac
catgagcttgatcccaccagatggaagagatttgagatccatgacatcgtcattgaatgc
gccaaagtgtctctggaccccaaggaagcgtcgtgtgaggagggctatgcgaccatgccc
gagaacctctacccccagatgcagctttgtccacaagactcagcctctagcccctacaca
gacttccacagcagcttcggaagctcctctttgacccccttatctgccccacgccagccc
caaccaccacccctgtccctgccccctctgtcagggactcagtcctcctatcgcagcccc
cagacctccagacgtcagaactctagctgtgaactcaactcgacctgtgggggcaaagaa
ctgtggagcccctcctcccagtgtggaatggccacacccccttcctccaggggcatgtca
cctaacccagagctctcccatagtgcctcttacctctcaggccaccgcgtccacagcaca
tcaggagggaaaggaacacctgcctcaagtactcctgccaccacctccccgccccccacc
ctctctgatgagttccccaccatccccctgacatccaacaccgctagtccaccacggaag
catggctgccctgtagaagcatccaaacctagcctggtgaggcaagaaccaatccgagat
cctgagaaagatgaagaggtcatcaacaacagagatgcaagtgatggtgggaccatttcc
atgacgctgacagaactttcagtctttatgcaggagcaggagctggagcttcagctgagg
acagagaaggagagggaagaagctgccatcacagaggagctcctggagatcacagaggac
aagcgagacttggctgccctgaggggctttgactcccccttctaccgcaccactgagacc
ctgacaggtacccaggagaaggccctgcccaaccacccactgggtggcctcatgctaccc
cgggacccccaccatgcggtgtccaccccagacaaggcactggagaatgcccagggcgct
aatggtggtggggacaatagtaggggctcggccctagagcagtcctggtctttccaaccc
atgtgtcccttcagccccatcgaacacccactccaccggagcccctctgccccggagtat
gagatggccaagttcggtggcctgttctcccccagcccctccatcaagaaccactccctg
ccctatgaggtcctgtttgatctggctctgccccgggctgcatccctcttcgtggggagg
aggacatcagaggccctgggcagggctgctctcgagaggctgtgccagaggcaggagggg
ctggaggacagggaggagggtcaggggagggtgtcggcttcccccctggaggtgctggat
cgtctcgttcagcagggaagcgacgcccacgacaaggtgctcaacagattacctttgcca
agcaagtcagctgactggacgcattttggaggcacggcgccgctggacgagctgcacacg
ttgcgtagccagctgctcctgctgcacagccagctgctgtacgaacgctacaagcgagag
cagcacgccgtccgcaaccgacgcctactgcgacgcgtcatcaacgccaccgcactggag
gaacagaacaacgccatgaaggaccagctgaacctccagagtgtggacatcatgtctctg
aaggagagtctgcaggtggagcagcagcgctgcagacagctgtgggacgaccgagagacc
gtggtcaccagactacacagccaggtccgccagctacaacagggccgggacgactactac
accaagaaccaggaactacagagtcagttgaatgagtatcagaagaagatgaatgagctg
gaggcagatctgcagaggtccaacaacaaggtgtgtcacacggggcaccttctcaaccag
atgactaccaagctgagcaccagtgagcgcacccagcagcagatgagcttcctgaacaag
cagctgctgctcctgggggaggcccacaagctggctgaacagcggcagcagcacacaggc
tcagacaatgccatggaggcccagatggtgcaggtgtcctgggggaaggaggtggagagg
ctgaggcagagcctgctgcagcagggccagaagctggaggcagcgcagcagcgggtgggc
gagctggagacacagctcaccaagaaggaacacctcatcgtggagcagaagaaatttctg
gaggacgtcaagggccgggccaagggcgagctgcaggcgtcagacagcaggtaccaggcc
cagaggagagtgacccagctcctgcagacggagctgctgcagctctacagtagactggaa
atggagggtcatgccaccctgaccacaccctccgcagggggcagcagtaccgatcctggc
cctcctatagactctagtatcatggagccagatggacccgtcacatcaggaaccaatgag
tggtcagataacggcagaccacctcagtccccacgacgcaacggcagcactttatctcca
gggcaacctatggcgaacaacccccctaagaagctccctgtcaactcggtcaacggcacc
caggaagtccccaagcctctccttgtggagccttcctgtacccatgcccccccactgccc
cccgacgccaccccccttactgttggctcctaccccagcgccaagagcttcctgggcatg
cgggcgcgagagctgttccggaacaagagcgagagccagtgtgacgaggagccgccaccc
cccccgcctggccggcctttcacagggcctgaagactga
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