Oncorhynchus mykiss (rainbow trout): 110522935
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Entry
110522935 CDS
T07259
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110522935 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110522935 (myo5b)
04131 Membrane trafficking [BR:
omy04131
]
110522935 (myo5b)
03029 Mitochondrial biogenesis [BR:
omy03029
]
110522935 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110522935 (myo5b)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110522935 (myo5b)
mRNA cycle factors
P-body specific factors
110522935 (myo5b)
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Myosins
110522935 (myo5b)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110522935 (myo5b)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110522935 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
Ac76
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110522935
NCBI-ProteinID:
XP_036833374
Ensembl:
ENSOMYG00000031585
LinkDB
All DBs
Position
5:39411380..39502640
Genome browser
AA seq
1867 aa
AA seq
DB search
MKRQVKEHSNIMKRQEGKIDHELYCKYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLE
DESPLEYRIGPKDNPLPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYC
GIVLVAINPYDQLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSG
ESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKY
IQIGFDRRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAE
DFIFTSQGENIFIEGVNDAEDFKKTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSE
RDGDSCHISRNDPHLTHFCRLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDA
LAKHIYAHMFDWIVEHVNKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQ
QQFNQHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQN
WCQKLYDRLSSSVHFQKPRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKAS
KFQLVADLFQDTNKDGSSSTSSSSKSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLL
METLNATTPHYVRCIKPNDEKEAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDF
FNRYRVLMKKSDMTVGDKKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADK
FRSACIKIQKTVRRWLQMVRYKKIRKSAITLQRFGRGYMARRYAERLRLTRAAVICQKQY
RMVRERTAYLRVRQAVVTIQAFTRGMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVA
RNAAITIQCAYRRMRAKRELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKT
QNEQLVVAKASLGSEVNKLQKELETMRSRQGDGSQLTSLKDELEKLRAELQEAHARRKKL
EEEHSNEKMRFEQRVEELERENSLLKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAE
LDEERQRYQNLLREFSRLEQRYDNLQEAKFQPGHRRNNSNQSSLESDSNYPSISTSEVGD
TDDAIQLVEEMGVEKAAMDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQSKRKGIEPKT
TSEQENADLAYNSLKRQELESENKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQ
LKAANEELDVRKEEVLILRSQIVTAAQQKEKDTTNHIETNNLPEWTNSKKPIDKEEALRS
YHGLCESKNKASDWGYLNEDGELGLAYQGLKQVARLLEAQLQSQARKHEDELEAFRTQIE
LLRDDIEKKQEMLNHTMSLSPEAQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQ
LRIYMKKVQELEVSVTAAASQSTTAKPEMTRQVTVQRREKDFEGMLEYYKEDEALLVKTL
ITDMKPHAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIKKVLKKNNDDFE
MTSFWLANTSRLLHCLKQYSGDEAFMTQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQ
LVKVAEHVMQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDKDEEGPGSYTLEALIRQL
GQFHGVMGEHGLDPEIAGQVIRQLFYSINAVTLNNLLLRKDVCSWSTGMQLRYNISQMEE
WLRGKNLHQSGAVINMEPVIQAAQLLQVKKKTSQDAEAICSLCTALTMQQIVKILNLYTP
LNEFEERVTVSFIRNIQNRLQERNDVPMLLVDTKHTFPVLFPYTPSALSLETLHIPANLS
LHFLTRV
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaagtgaaggaacatagcaacataatgaagagacaagaggggaagattgac
catgaactttactgcaagtacactcgggtgtggatcccagacccagaggatgtatggaga
gctgcagagatcatcaaggactacaaggagggagagccaatcctgcacctcaaacttgaa
gatgaatcgccgttggaataccgcatcggacccaaagacaaccctcttcccttcctccgg
aaccctgatatcctggtgggggagaatgacctcacagcgctcagctaccttcacgagcct
gctgtcctacacaacctcaaagtgcgcttcctcgagcccaaccacatctacacatactgt
ggtatcgtactggtggccatcaacccctacgaccagcttcagatctatggagaggaggtc
atcaatgcctacagtgggcagaacatgggagacatggacccacacatctttgctgttgct
gaggaggcatacaagcagatggccagagatgagaggaaccaatccatcatagtaagtggg
gagtcgggggcagggaagaccgtctctgctaagtacgccatgcggttcttcgccactgtg
ggagggtcggccaacgacaccaacgttgaggagaaggtgctggcctccagccccatcatg
gaggctattggaaatgcgaaaaccacgcgcaatgacaacagcagtcgttttgggaagtac
atccagattggttttgacaggcgttatcacataataggtgccaacatgcgcacatatctg
ctggagaagtcgagggtggtgttccaggctgaggatgagaggaattaccacatcttctac
cagttgtgtgcctctgctagcttcccggagttcaaagacctagccttgaccagtgcggaa
gacttcatcttcacatcgcaaggagagaacatcttcattgagggggtgaatgatgccgag
gacttcaagaagacgaaggaagcctttacactactgggtgttaaggagagcaatcaaagc
agcatcttcagaatcatagcttccatcctgcatctggggaacgtggagatctgctcggag
agagacggagactcctgccacatatcaaggaacgaccctcacttgacgcacttttgccgg
ttgctgggggtggagctggagcagatggaacactggctatgtcacaggaagctggtcacc
acgtcagagacctacgtcaagaacatgtcccgcaaacaggcggctaatgcccgcgacgcg
ctcgccaaacacatctacgcacacatgtttgactggatcgtggagcacgtcaacaagtcc
ctgcacacctcctccaaacaacactccttcatcggtgttctggacatctacggatttgag
acctttgagataaacagcttcgagcagttctgcatcaactacgccaatgagaaactgcag
cagcagttcaaccaacatgtgttcaagctggagcaggaggagtacatgaaggagcagatc
ccctggacgctcatcgacttctatgacaaccagccgtgtatcgacctcatcgaggccaag
ctgggcattctggacctgctggatgaggagtgcaaggtgcccaaagggacagatcagaac
tggtgccagaagctgtacgatcgcctttcaagcagtgtccatttccagaaaccacggatg
tccaacatatctttcattatcattcactttgctgataaggttgagtaccagtgtgatggc
ttcctggagaagaacagagacaccgtctacgaggaacacatcaacattctgaaggccagc
aagtttcagctcgtggcggatctgttccaggacactaataaagacggaagcagctccacg
tcttcttccagcaagtcctccaggatcaacgtgcgctcagccaaaccgacacctaaagtc
cccaacaaggaacacaggaaaaccgtgggccaccagttccgcagctccctgcagcttctc
atggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgag
aaggaggcattctcgtttgactctaggagagctgtgcagcaactgagggcatgtggagtc
ctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtacccagacttc
ttcaacagatacagagtcctcatgaagaagtcagatatgaccgtaggagacaagaaactg
gtgtgtaggaacctactagagaccctggtcaaggacccagacaagttccagtttggtaag
accaagatcttctttcgggcgggccaagtggcctacctggagaagctgagggcagacaag
ttccgctccgcctgcatcaagatccagaagacagtgcgacgctggctacagatggtccgc
tacaagaagatacgcaagtctgccatcaccttgcagagatttggccgcggttacatggcc
cgcaggtatgcggagcggctgcgtctaacccgcgctgctgttatctgtcagaagcagtat
cgtatggtccgagagcggacggcctatctgagggtgagacaggctgttgtcaccatccag
gcctttaccaggggcatgttcacccgcaggatcttccaggagttccttctgcatcacaaa
gccatgatcatccagaagcatgtccgaggctggctcaccaggaggaagttcaaggtggca
cggaacgccgccatcaccatccagtgtgcctaccgccgcatgcgagccaagcgggagctg
aaacagctgaagattgaggcgaggtccgctcaacatctgaagaagctcaacacgggcatg
gagaacaagatcgtccaactgcagaggaagatggatgaccagaccaaagatctgaagact
cagaatgagcaactggtggtggccaaagcctccctgggctcagaggtgaacaagctgcag
aaggagctggagaccatgcgcagtcgtcagggagacggcagtcagctgacctctctgaag
gatgagctggagaagctgagggcggagctccaggaagcacatgcccgcaggaagaagctg
gaggaggagcacagcaacgagaagatgagatttgaacagagagtggaggagctggagagg
gagaattccctgctgaagagtgaaaaggagaagatgaaccaaaggattctgcaccactcc
aagagcacagaagaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagag
ctggatgaggagaggcagcgctaccagaacctgctcagggagttctccagactggagcag
agatatgacaacctacaggaggccaagtttcagcctggccacaggaggaacaattctaac
cagagcagcctggagtctgactccaattatccctccatttctacctcggaggtgggagac
actgacgatgccatccaactcgtagaggagatgggagtggagaaggcagcaatggacatc
ggtgtattcatgaagctgcagaagcgtgttagggagctggaacaggagaggaagagactg
caagtcaacctggaaaagatggaggaccagtctaagcgcaagggcattgagccaaagacg
acatcagagcaagagaatgcggatctggcctacaacagtctcaagagacaggagctggaa
tctgagaacaagaagctgaagaatgacctaaacgagctgaggaaggccatcgctgaccgc
gcctccaagaacagctcctccaatgagcttcaggacggctacaacctgttgctgggccag
ctcaaggcagccaatgaggagctggatgtgcgtaaggaggaggtccttatcctcaggagt
cagattgtcactgcagcccagcagaaagagaaggacacaaccaatcacattgaaaccaat
aacttgcctgaatggaccaacagcaagaagcccatagacaaggaggaggctctgaggtcc
tatcatggactctgtgagtctaagaacaaagcttctgactggggttatttgaatgaagat
ggcgagctgggcctggcataccagggtctaaagcaagtggccaggctgttggaggcccag
ctccagtctcaggccaggaagcacgaggatgagctggaggcgttccgcacccagattgag
ctgctaagggacgacatagagaagaagcaggagatgctaaaccacaccatgtctctgtcc
cctgaggcccaggtggaatacagcgtccagcaggagatcacccgcctcaccaacgacaac
ctggacttaaaagagcttgtggagaaactggagaagaacgagaggaagctgaagaagcag
ctgaggatctacatgaagaaagtacaggagctggaagtgtccgtgactgcagcagcatcc
cagtccaccacagccaaaccagagatgacccgtcaggtgactgtccagcgcagagagaag
gactttgagggcatgctggagtactacaaagaggacgaggccctgctggtcaaaacgctc
atcaccgacatgaagccccatgctgtatcagcaacagtgccctgcctaccggcctacatc
ctcttcatgtgcatccgccatgcggactacatcaacgatgaccagaaggtccactctctg
ctcacctccaccatcaacgccattaagaaggtcctcaagaaaaacaatgatgactttgag
atgacctccttctggctggccaacacgagccgtctgctgcactgtctcaagcagtacagt
ggagatgaggcgtttatgactcagaacacggccaagcagaatgagcactgtctgaagaac
tttgacctggcagagtaccgccaggtgctgagtgacctctccatccagatctaccagcag
ctcgtcaaggtggcagagcatgtgatgcagcccatgatcgtgtcggccatgttggagagt
gagtctatccccagccttgcgggagtgaagcccatgggttacaggaaccgctcctccagc
atggacaaggacgaggagggcccagggagctacaccctggaggccctgatcagacagctg
ggccagttccacggggtgatgggcgagcacggcctggacccagagatagcaggccaggtg
atccggcagctgttctacagcatcaacgctgtcaccctcaacaacctgctgctcaggaaa
gacgtctgctcctggagcactggcatgcagctccggtacaacatcagtcagatggaggag
tggcttcgggggaagaacctccaccagagcggggcagtgattaacatggagcccgtcatc
caggccgcccagctgcttcaggtcaagaagaagacgtcccaggacgccgaggccatctgc
tcactgtgtaccgctctcaccatgcaacagattgtgaaaatcctcaacctctacaccccg
ctcaacgagtttgaggaaagagtcactgtgtccttcatcagaaacatccagaatcgtctg
caggagaggaacgatgtcccaatgctcctggtggacaccaagcacaccttccctgtccta
ttcccctataccccctcagcccttagcctggagacccttcacatccctgccaacctcagc
ctacacttcctcactcgagtctga
DBGET
integrated database retrieval system
