Oncorhynchus mykiss (rainbow trout): 110522948
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Entry
110522948 CDS
T07259
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110522948
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110522948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
110522948
NCBI-ProteinID:
XP_021457058
Ensembl:
ENSOMYG00000020230
UniProt:
A0A8C7VR02
LinkDB
All DBs
Position
5:complement(42308713..42326570)
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AA seq
395 aa
AA seq
DB search
MMVHCAGCDRPILDRFLLNVLDRAWHAKCVQCCECHCNLTEKCFSRDGKLYCKIDFFRRF
GTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDTKETDNSMSSDKDMNNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYTEYQGDYYGGGGNYDFFPHGP
PSSQAQSPAESPYIHGGAMEGSVSAHHPSDDQRFTDMISRADTPSPEPGLPSSLQPVPGE
VYGGGPSPPFSLASNSSYSAPMSHPGQEMGETTVW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgcggggtgcgacaggcccatcctggaccggttcctgctcaacgtg
ttggaccgagcctggcacgccaagtgcgtccaatgctgcgagtgccactgtaacctgacg
gagaagtgcttctcgcgtgatgggaagctttattgtaaaatagactttttcaggaggttt
gggacgaagtgcgcgggctgcctccaaggcatctctcccagcgatcttgtgcgcaaggcg
cgcagcaaggtgttccatctcaactgcttcacgtgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctatgtcatcgacgaaaataagtttgtgtgcaaagaagactaccta
agctcaggggctatcaaggaagtcaatttgaattcagtgtcatcatgcacagacagaagt
ttatcgccggacctccaggatccgatacaggacgatacaaaagagacggacaattccatg
tcctcggataaggacatgaacaataacgagaatgaggagcagaattcgggcacgaagcgg
cgaggcccgcggaccaccatcaaagccaagcaactggagacgctgaaggctgccttcgtg
gccacgccgaaacccacacgacacattcgggaacagttggcccaggagacgggactcaac
atgcgggttatacaggtgtggttccagaaccgtcgatctaaggagagaaggatgaagcag
ttgagtgctttgggggcccggcggcatgccttcttcagagggccccggaggatgaggccc
ctgggaggacgactggaggacccagacatactggggcctggggcctatggatactacaca
gagtaccagggcgactactacggaggagggggaaactatgacttcttcccccacggccct
ccctcctctcaggctcagtctccagcagaatccccctatatccatggaggtgccatggag
ggctctgtgtcagcccaccacccctctgatgaccagaggttcacggacatgatctcccgc
gcagacacccccagccccgagcccggcctgcccagctccctgcagcccgtccctggggag
gtgtatggaggggggcccagcccacccttctccctggctagtaactctagctacagcgcc
cccatgtcccaccccggacaggagatgggagagaccaccgtctggtag
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