Oncorhynchus mykiss (rainbow trout): 110522976
Help
Entry
110522976 CDS
T07259
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110522976 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110522976 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
NACHT
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DUF4062
AAA_16
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
NPHP3_N
PEP5_VPS11_N
AAA_22
WDR90_beta-prop_4th
Beta-prop_DCAF4
NPHP3
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_VPS8
Nucleoporin_N
AAA_25
AAA
ATPase_2
WD40_like
Beta-prop_SCAP
Beta-prop_IP5PC_F
Viral_helicase1
RuvB_N
AAA_18
Beta-prop_WDR19_2nd
AAA_11
nSTAND3
AAA_33
AAA_30
NTPase_1
AAA_14
RNA_helicase
AAA_19
AAA_28
cobW
AAA_17
Motif
Other DBs
NCBI-GeneID:
110522976
NCBI-ProteinID:
XP_036834947
Ensembl:
ENSOMYG00000031170
LinkDB
All DBs
Position
5:57039117..57061390
Genome browser
AA seq
1712 aa
AA seq
DB search
MASPRGALMEVLKGQATEGLKLRSNVVRVFVSSTFTDMSSERNALLDKTYPELQAFCQSL
GLVFEVVDMRWGLQDAIAVDHMTTELCLQEIEACRKVSVGPSFIALLGNRYGHRPIPRVL
PGKQFEVLLSKLPQDQVGLLHQWFRKDNNAVPPVYVLQPITTLLPHYNDLQPERRPLQDD
SVISWRYTEARLLQLLRTAAVQAEKDGDITVEQKHQFFKSVAEHEIEEGLRIPDGDESEP
SAILFVRELPHLRKKDGPKRLAQYMDVTADGLLDTEAQELLSGLKSRLFAASPGMLNLHS
VELCKGAIEPSCKEHAQYLESLCEQLVSQTKARIRRRVGAGSSVEAGEVRTNGARGGDAS
QRKGEEDRGWLLQELSHHMALSAGKCSGVFRGREGLLGKICLAMWEHTNTRHTPLVVHGP
PGVGKTTLLCKLAQEMRGLLDPRAVVVLRLLGTSAESSDLGRVLQSVCFQICSVFSLSPP
TPITAHTSEDLVRFFHGLLAEVSERGDTLLLILDSLDQLSSATQGQKLHWLPKDIPPNVH
LVVSTADTGSPVLANLRRTVEVPGNFFEVEPLSCDQGREIMNAYMREVQRSLTPEQCEVV
LCSFQLSGNPLHLKLLLDMARRWASYTPVTDLAPSSSAQEVMSQLLQALEERHGKQLVGA
ALGYIVSARGSLSEAELRDILSLDDNVLAEVYQYWLPPNHSLIRLPPLLWVRLRHDLGEL
LVEGQANGVTVLDFHHKLLTETVRERYQRSEQQADRHRVLAEYFLGSWSQGRFKAVLLPP
LTTTLDADRKVPPQPLWFAEGVANVKKLQELPYHLLHAGLWEELRQEVIGSSEWLYCKTL
TCGVASVIEDLTLCTKLMDCPETQLIRDTFILLKPTLDFLDGQMGQMGQGGWYRRLSSLW
LGTRNIGIILGWVGGWVILYQESLLFTLSHQLSHSVLILCFLSKDPPLFYTEVLARLHSF
AEMYPSLIGRLCCQCHDWLSCCPDPILVPKCTFLQPPGGALKTTLAGFQKGVTALDICPE
RGILLAGSEDGKVIAWDLNDLEVIQTLVGHTAKVLSVRVIDSGTHCLSLAADGSLRKWSL
LSGRQLYCTQEAVSINSLPSTTHIHVSEERALVFTHSGGQGKVWHLNTTELLFQVKDTGV
SIILGFLNGMVVSLSDGGLVTFSHPSAEDKTAQIHLEKSSHSLTLTATLTLQRNGRLLIA
SKEGFLYQVSSTVQGRQSQWTLRQTVTELPVCATFLSASDDERILLAGCERTLVLFHRES
DCVQSFLDLHHEDTVLCACVSSDSRVVISGSEDQTIRVWSMTTGNLLDCFLGMDAPVTTL
ALNEGTVVSASSSAYYLKLWHLPSPNNPQQRPNCCIPAGCPQVALTKDGDTVYYVRNVGQ
KEVITWNCHTGSSTDTMAVSAEVCCLELAQNKKLLFCGLTTGTVLIYPLAFPKETLCIPP
PETLPTVRCMAIGGQEKHMAVAYEDSVCLFEITARDSFPSVEGPSARFALSLLHSPVSSM
ALLPDCRLLYGTACGEVTMYDFKSASTATLDGHRSRVNCVTTSNWGTHALVGSEDAVQRL
WGLTPLVLDHTMEYKGFLFEGVLCAAFSGSDKHVFTGSQDRTIKVWDVASGSLLFVQYVY
APVTKMLTYRNGFVAISQLGYVIKEGFRCPDGVCPEYNPLRNVNAHYRVTSRQKSADSPH
SVITEIPEYNPAQFNFMALMLKSKPSHSCQLL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccaagaggagcactcatggaggttctcaaaggccaggcgactgaaggactg
aagctcaggtccaacgtggtccgagtctttgtcagctccacatttacagatatgagcagt
gaaagaaatgccttattggacaaaacctatcctgaacttcaagctttttgtcagagtctg
ggcttagtgtttgaggttgtggatatgagatggggtctccaggatgcaattgctgtggac
cacatgaccacagaactgtgtcttcaggaaatcgaggcctgcaggaaagtatccgtagga
ccaagtttcattgctctgctggggaaccggtatggccaccgccctatcccccgtgtcctc
ccaggaaaacaatttgaggtgctgctgtccaagctaccacaggaccaggtggggcttctc
caccaatggttcaggaaagacaacaatgctgttccgcctgtctacgttcttcagccaatc
acaactctgttgccccactacaatgaccttcagcctgagagaaggccgctacaggatgac
agtgtcatttcctggcgctacacagaggctcgattattgcagctcctacgcactgcggcc
gtgcaggctgaaaaagacggggatataacggttgaacaaaaacaccagttcttcaaatct
gtggcggagcatgagatagaggagggtctgcgaattccagatggggacgagagcgagccc
tccgccatcctcttcgtgcgggagctacctcacttgcgtaagaaggacggcccgaagcgg
ctggcccagtacatggatgtgacggctgatggcctgctggataccgaggctcaggaactc
ctctcgggcctcaagtcgcgtctcttcgctgcctcgccgggcatgctcaacctgcacagt
gtggagttgtgcaagggagccatcgagcccagctgcaaggagcatgcccagtacctggag
agcctctgcgagcagctcgtgtcccagacgaaggcccgcattcgcaggagggttggtgct
ggttcgtcagtggaggctggtgaagtgaggacgaatggggcaagaggaggagatgcaagt
cagaggaagggggaagaggaccgaggttggctgctccaggagcttagtcaccacatggct
ttgagtgccgggaagtgttcaggcgtatttcgcggcagggagggactccttgggaagatc
tgtctggccatgtgggagcacaccaacacccgccacacgcccctggtggtgcatgggcca
ccaggtgtgggaaagacaacgctgctctgcaagctggcacaggagatgcgtggcctcctg
gaccccagggctgtggtggtgctcaggttgctggggacgtcggcagagagctccgacctg
ggccgtgtcctccagagtgtctgtttccagatctgctctgtgttcagtttgtcacctccc
actccaataacagcacacacgagtgaggacctggtgaggtttttccatggccttctagct
gaggtgtcggagcgaggagacacacttcttctgatactagactccttggaccaattgtct
tcagccacccagggccagaaactccactggctacccaaagacatcccccccaatgtccat
ttggtggtgtccaccgcagatacaggctctccagttttggctaaccttcggagaacagtc
gaagtaccgggaaatttctttgaagtagaacccctatcatgtgaccagggcagagagatc
atgaatgcctacatgagggaagtgcaacgaagcctgactccagaacagtgtgaagtggta
ctgtgtagctttcagctgagtggaaatcctctgcatctgaagctactgctggacatggcc
aggcgatgggcgtcctatacacccgtgactgacctggccccgagcagtagtgcacaggaa
gtgatgtcacagctactccaggcccttgaggagaggcatgggaagcaactggttggcgca
gctttgggatatatcgtttctgctaggggtagtctatcagaggcagagctgcgtgatatc
ttgtcccttgatgacaatgtcctggctgaagtctaccagtactggcttccccccaaccac
tccctcatccgcctcccccctctactgtgggtgcgcctcaggcacgacttgggagaactc
ctcgtggagggacaggccaatggcgtcacggtgctcgacttccaccacaagctgttgact
gaaactgtgcgagagaggtaccagaggtcagagcagcaggctgacagacacagggtcctt
gctgagtacttcttgggtagctggagccaaggccgattcaaagctgtcctcctaccccca
ctgacgaccacattggacgctgaccgcaaggtgccccctcagcctctgtggttcgctgaa
ggagtggcaaatgtcaaaaagctgcaggagctgccctaccacctcctccacgcaggcctc
tgggaggagctgcgccaggaggtcataggcagtagtgagtggctgtactgtaagactctg
acctgtggagtggccagtgtcattgaggacctgaccctctgcaccaagctcatggactgc
cccgagactcaactgatccgagacactttcattctcctcaagcccaccctggactttcta
gatggccagatgggtcagatgggtcagggggggtggtatcgtagactctcgtccctctgg
cttggaaccagaaacattggcattatacttggatgggtgggtggttgggtgatactgtat
caggagagccttctcttcacactgtctcaccaactatctcactctgttctaatactatgt
ttcctctccaaagacccccccctcttctacacagaggtcttggccaggctccactccttc
gctgagatgtacccttcactgataggacgactctgctgccagtgtcacgactggctctcg
tgctgtcccgaccccatccttgtccccaagtgcaccttcctccagcctccagggggagcg
ctaaagacgacgcttgctggtttccagaaaggggtcacagctctggatatttgcccagag
agagggatcctgctggcaggctcagaggacgggaaggtgattgcctgggacctcaatgat
ctagaggtcatccaaaccttagtgggacacacagctaaggtgctatcagtgagagtgatt
gacagcggcactcactgtctctcattggctgctgacgggagtctgaggaagtggagcctg
ctgagtggcaggcagctgtactgtacccaggaggcggtgtccattaactccttaccttcc
accacacacatccatgtgtctgaggagagggcgcttgtcttcactcactctggaggccag
gggaaagtatggcatcttaacacaacagaactactcttccaagtcaaagataccggtgtc
tccattattcttggatttttgaatggaatggtcgtctccctctcagacggaggacttgtc
acattttcccacccatctgccgaggacaagacagcgcagatacatttggaaaaatcttca
catagtttgacgctgacggcaacccttacactgcaaagaaatggccgactacttatagca
tccaaggagggctttctctatcaggtttccagcacggtacagggcagacagtcacagtgg
actctgagacagacagtcacagagcttccagtctgtgcaaccttcctctccgcctcagat
gacgaaaggatacttttggcaggctgtgagaggacactggtccttttccatagagagtca
gactgtgtccagagcttcctggatctgcaccacgaggacacggtgttgtgtgcctgtgtg
tcaagcgacagcagagtggtcatctcgggctctgaggaccagactatacgggtgtggtct
atgaccacgggaaacctccttgactgtttccttggcatggatgcccctgtcaccactctg
gctctgaatgagggcactgtcgtctccgcctcctcctcagcctactacctgaagctgtgg
catctgccctcacccaacaaccctcagcagagacccaattgctgcattccagccgggtgc
cctcaggttgccctcactaaagatggcgacacggtatactatgttagaaacgtaggccag
aaagaagtgattacatggaattgtcacacaggctcttccactgacaccatggccgtctct
gctgaggtgtgttgcctagagctggcccagaacaagaaactcctcttctgtggcctcacg
actggcacggtcctcatctaccccctagccttccccaaagagaccctgtgcatcccacct
cctgagaccctgcccacggtgcgctgcatggccattggcggccaggagaagcacatggcc
gtggcctacgaggactcagtgtgtctgtttgagatcacggccagggacagtttccccagc
gtggaggggccctccgcgaggtttgccctctccctgctccactcgcccgtctcctccatg
gccctgctcccagactgtaggctgctgtacggaacggcctgtggggaggtcaccatgtac
gacttcaagtccgcctcaaccgccaccctggatggccaccgcagcagggtcaactgcgtg
acgaccagcaactgggggacgcacgccctggtgggctcagaggacgccgtgcagaggctg
tgggggctgacccccctggtgctggatcacaccatggagtacaaggggttcttgtttgaa
ggggttctctgtgcagcgttctctgggagtgacaagcacgtcttcactggctcacaggat
agaactattaaagtctgggatgttgctagtgggagtctgttattcgtccagtatgtctac
gctcctgtcaccaaaatgttgacctacaggaatggctttgtggcaatctctcagctgggc
tacgtcatcaaggaaggattccgctgtccggatggcgtctgtccggaatataacccactc
cggaacgtcaacgcacactacagggtcacgtcccggcagaagagtgcagacagccctcac
agcgtcatcacagagatccctgagtacaatcccgctcagtttaacttcatggccctgatg
ctcaagagcaaaccctctcactcatgccaactgttgtaa
DBGET
integrated database retrieval system
