Oncorhynchus mykiss (rainbow trout): 110523261
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Entry
110523261 CDS
T07259
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04210
Apoptosis
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110523261
09142 Cell motility
04820 Cytoskeleton in muscle cells
110523261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110523261
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110523261
Intermediate filaments
Intermediate filament-binding proteins
110523261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
110523261
NCBI-ProteinID:
XP_021457466
Ensembl:
ENSOMYG00000043696
LinkDB
All DBs
Position
5:14376959..14429468
Genome browser
AA seq
2508 aa
AA seq
DB search
MATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFKELSGVRRQKLEDSYRFQFFRRD
ADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISE
GHFASETIRTRLEELHRLWDMLLQKTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAMA
TSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLSQESHPEAELIVRKQEE
VNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQA
LLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLAAE
RHARLNDSYRLQRYTSDFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDA
HEDSFKATDEAGKALLNTGHYASEEVKEKLGVLTEEKESLLELWEVRRQQYEQCMDLQLF
YRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATK
LIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFSRDSDELKSWINEK
MKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVSVR
MDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTS
VQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIKRKQEALMARYDALRDP
MAARKQKLSDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAE
IAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLEELNGRWDTLKGKAGQRRQDLEDSLQA
QQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQ
AQTCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDR
QGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQPLAKEACSVSVRMKQVEELY
GTLQELGEKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKF
DDFQKDLKANESRLRDINKVASELESEGLMAEEATMVQAQEQVMLGSAPGQDEADNKNAS
PWKNVRLAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIE
EKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDI
QEKCTELNTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKD
VTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERADL
EKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDF
DKAINVQEEKIAALQSFADQLVGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGES
QTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADR
IRGVIDTGNALIHRGACSGSEDAVQSRLGALDEQWQFLVNKSAEKSQKLKEANKQQNFNT
GIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLT
ASTAFDPTQVKDKRDAVNGRFTKIKSMATGRRAKLNESHRLHQFFRDLDDEESWIKEKKL
LVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQDEIEQRL
AQFEEHWMELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAV
QGLLKKHEAFETDFSVHRDRVNDVCSNGDELIKKNNHHVDSISAKMASLRGKVSELERAA
AMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDEYGRDLSSVQTLLTKQETFDAGL
QAFQQEGITNITALKDQLLAAKHVQSKAIETRHAALMKRWNQLLDNSQARKKKLLEAQEH
FRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSSAQA
DFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDK
LRQEFAQHANAFHQWLQETRTYLLDGIAYRRVVRVIQYEVGDDLSRRSCMVEESGTLESQ
LEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRM
QHNLEQQIQARNTTGVTEDALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEE
GEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYV
TKEELYQNLSKEQADYCISHMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggagtctgct
gatgacatccaggagcgccggcagcaggtgttggaccgctaccggcgcttcaaggagctg
tcgggcgtgcgacggcagaagctggaggactcgtaccgcttccagttcttccgccgcgat
gctgacgagctggagaagtggatccaggagaagctgcagattgcctctgatgagaactac
aaggaccctaccaacctccagggcaagctccagaaacatcaggcctttgaggcggaggtg
caggccaacgctggagccatcattaagctagacgagactggcaaccttatgatctccgaa
ggccactttgcctccgaaaccatccgcactcgtctggaggagcttcaccgtctttgggac
atgctgctgcagaagaccaaggagaagggtgtccgtctacttcaggcccagaagctagtg
cagtacctgcgcgagtgtgaggatgccctggactggatcagtgacaaggaggccatggcc
acctctgaggagctgggccaggacctggagcacgtagaggtgctacagaagaagtttgag
gagttccagacggacctggcagcccacgaggagcgtgtgaacgaggtgaaccagctggcg
ggcaagttgagccaggagtcccaccccgaggcggagctcatcgttcgcaagcaggaggag
gtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcaggctgttc
ggagccgccgaggtgcagagatttaacagggatgtggacgagaccattagctggatcaag
gagaaggagcagctcatggcatccgatgactttggccgggacctggccagcgttcaggct
ctgctgcgcaagcatgagggcctggagagagacctggctgccctcgaggacaaggtcaac
actctgggcggagaggctgaacgtctgcagcagacccacccccagaacgcctcccagatc
cacctgaagagggatgagctcatcaccaactgggagcagatccgcacgctggccgccgag
cgccacgcccgcctcaacgactcctacaggctgcagcgctacacttcagacttccgtgac
ctgaccagctgggtgacggagatgaaggccctgatcaacgctgatgagctggccaacgac
gtggctggagctgaggctctcctcgaccgccaccaggaacacaagggtgagattgacgcc
catgaggacagcttcaaagccacggacgaggctggcaaggctctgctcaacactggacac
tacgcctcagaggaggtcaaggagaagctgggtgtactgactgaggagaaggagtctctg
ttggagctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcagctcttc
tacagggacacggagcaggtcgacaactggatgagcaagcaagaggcgttccttctgaac
gaggatcttggtgactctctggacagcgtggaggccctgctgaagaaacacgaggacttt
gagaagtccctcagcgcccaggaggagaagatcactgccctggatgaatttgccaccaaa
ctgatccagaacaaccactacgccaaggaggatgtggccactcgtagagatgctctgctg
agccgccgtaacgccctgcatgagcgtgcccagtcccgccgcgccgccctggaggactcc
ttccacttgcagcagttctcccgcgactcggacgagctcaagagctggatcaatgagaag
atgaagacggccaccgacgaagcctacaaggatccgtccaacttgcagggcaaggtccag
aagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgacgcgctgcag
aagtctggacaggagctcctggacggcaagcactacgccgccgacgaagtgtcggtccgc
atggatgaggtcagctcccagtggaagaagctgctggaggccactgagctcaaaggcatc
aagctgcgtgaggctaaccagcagcagcagttcaacaggaatgtggaggacattgagctg
tggctttacgaggtggagggccacctggcctccgacgactacggcaaggacctgaccagc
gtccagaacctgcagaagaaacatgccctgctggaggccgatgtggccgcacaccaggac
cgcattgacggcatcaccatccaggcgcgtcagttccaggaggcgggccactttgacgcc
gacaacatcaagcgcaagcaggaggcgctgatggcgcgctacgacgcccttcgcgacccc
atggctgcccgcaagcagaagctatcggactcgctgcggctgcagcagctcttcagggat
gtggaggacgaggagacctggatccgggagaaggagcccatcgccgcctccaccaaccgg
ggcaaagacttgattggcgttcagaacttgctgaagaagcaccaggccctgcaagcggag
atcgccggccacgaaccccgcatcaaggctgtcacccagaagggagaggccatggtggag
gaaggtcactttgccggagaggaggtgaaggtgaagctggaggagctgaacggccgctgg
gacaccctgaagggcaaggccgggcagcgcaggcaggacctggaggattcgctgcaggcc
cagcagtactttgccgacgccaacgaggcagagtcctggatgagggagaaggagcccatt
gtgggcagccccgactacggcaaggacgaggactctgctgaggccctgctgaagaagcac
gaagccctgatgtctgatctgagtgcctatggaagcagcatccaggctctgaaggagcag
gcccaaacctgtaggcaacaagtggctcccaccgatgatgagacaggtaaagagctggtg
ctggccctctatgactaccaggagaagagcccccgcgaggtcaccatgaagaagggagac
atcctcaccctgctcaacagcactaacaaggactggtggaaggtggaggtgaatgaccgc
cagggttttgttccggcagcctacgtcaagaagctggatcccacccagtcctcttccaga
gagaacttgctggatgagcagggcagcatcggcctgcgccaggatcagattgagaaccag
ccgttggccaaggaggcgtgcagtgtgtctgtacgcatgaagcaggtggaggaactgtac
ggaactctccaggagctaggcgagaagcgcaaggacatgctggagaagagctgtaagaag
ttcatgctgttccgcgaggccaacgaactacagcagtggattaacgagaaggagggagcc
ctcaccaatgaggaggtgggctccgacctggagcaggtggaggtgctgcagaagaagttt
gacgacttccagaaggacctgaaggccaatgagtctcgtctgagggacatcaacaaggtg
gcgtctgagctggagtctgagggcctgatggccgaggaggcaaccatggtccaagctcag
gaacaagtgatgctgggatctgctcctggccaggatgaggctgataacaagaatgcctct
ccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatactatcaaggag
ctgaacaaccgctggagatccctgcagcagctggctgaggagaggagcaacatgctgggc
agtgcccacgaagtgcagaggttccacagggatgcggatgagaccaaggagtggattgag
gagaagaaccaagcgttgaacacagacaactatggccacgacctggccagcgttcaggcc
cttcagcgcaaacacgagggctttgagagagacctggctgccctgggagataaggtgaac
tccctgggggagacagcggagcgtctgatccagtcccacccggaggcagtggacgacatc
caggagaagtgcacagagctcaatacggcctggagcagtctggtagggcgcgccgaccag
cgaaaggataagctaggcaactcccacgacctgcagcgcttcctctccgacttcagggac
ctcatgtcctggatcaacggcatccgaggcctggtgtcctcagaagagctggccaaggac
gtgaccggggctgaggccctgctagagagacaccaggagcaccgtactgagatcgacgcc
cgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggcgcgcggccac
tatgccagtcctgagatccagcagaagctggaggccttggaccacgagagggcagacctg
gagaaggcctgggtgcagagacgaatgatgctcgaccagtgcctggagctccagctgttc
aaccgtgactgtgaacaggctgagaactggatggcggctcgcgaggccttcctggccagc
gacgacaagggtgactccctggacagcgtggaggctctcatcaagaaacacgaggacttt
gacaaggccatcaacgtacaggaggagaaaatcgctgctctgcagtcctttgcagaccag
ctggttggcgctgatcattatgccaaaccagagatattcaaccgtcgcaatgaagtcctg
gacaggtggcgccgtctgaaggctcagatgattgagaagcgctccaagctgggcgagtcc
cagacgctgcagcagttcagccgcgacgtggacgagatagaggcctggatcagcgagaag
ctgcagacagctacagacgagtcctataaggaccccaccaacatccagctgtcgaagctg
ctgagtaagcaccagaagcaccaggccttcgaggcggagttgcatgccaacgcagaccgc
atccgtggggttatcgacactggcaacgccctcatccatagaggggcctgctccggcagt
gaggatgcggttcagtcacgtctgggtgctctggacgagcagtggcagttcctggtgaac
aagtcggcagagaagagccagaagctgaaagaagccaacaagcagcagaacttcaacact
ggcattaaggactttgacttctggctctctgaggtcgaggcccttcttgcctctgaggat
tatggcaaagacctggcctccgtcaacaacctgctgaagaaacatcagcttctggaagcc
gacatctctgctcatgaggatcgtctgaaggacctgaacggccaggctgacagcctgacg
gccagcacggccttcgaccccacccaggttaaggacaagcgcgacgctgtcaatggacgc
ttcaccaagatcaagagcatggccactggccgccgtgcaaagctcaacgagtcgcaccgc
ctacaccagttcttcagggacctggacgacgaggagtcttggatcaaagaaaagaaattg
ctagtgagttcggaggactatggacgtgatttgactggagtgcagaatctgaggaagaaa
cacaagaggctggaggctgagttgggggcccatgagccggccatccagtctgtgcaggac
acagggaagaagctgtccgatgacaacaccatcggccaggatgagattgagcagaggctg
gcccagtttgaggagcactggatggagctgaaggacctggctgcagccaggggacagagg
ctggaggagtcgctggagtaccagcagtttgttgcgaatgttgaagaggaggaagcctgg
attaacgagaagctgaacctggtgggaagtgaagactacggggataccctggctgctgtg
cagggcctgttgaagaagcatgaggcgtttgagactgacttctctgtgcacagggacaga
gtgaatgacgtgtgttccaacggagacgagctcatcaagaagaacaaccaccacgtggac
agcatctcagccaagatggcgtccctgcggggcaaggtgtctgagctggagagggccgct
gccatgagaaaagccaagctggatgagaactctgccttcttgcagttcaactggaaggct
gacgtggtggagtcctggatcggtgagaaggagaacagcctgaagacggatgagtacgga
cgagatctctcctctgtgcagaccttgctcactaagcaggagacgtttgacgcagggctg
caggccttccagcaggagggtatcaccaacatcacagccctcaaggaccagctgctggcg
gccaagcacgtccagtccaaggccatcgagacgcgccacgctgccctcatgaagcgctgg
aaccagcttctcgacaactcgcaggcccgcaagaagaaactgctggaggcccaggagcac
ttcaggaaggtggaagacctattcctgacctttgccaagaaggcttcggccttcaatagc
tggtttgagaatgctgaggaggacttgacagatccggtgcgctgcaactcgctggaggag
atccgggcgctgcgcgacgcccacgaggccttccgctcatcgctgagctcggcgcaggcc
gacttcaaccagctggccgagctggaccggcagatcaagagctaccaggtggtgtccaac
ccctacacctggttcaccatggaggccctggaagagacctggaggaacctgcagaagatc
atcaaggaacgagagctggagctgcagaaggagcagaggcggcaggaggagaatgacaag
ctgcggcaggagtttgcgcagcacgccaatgcattccaccagtggctgcaggagaccagg
acatatcttctggatggcatagcttatcgacgggttgtccgtgtcattcaatatgaagtc
ggtgatgatctttcccgaaggtcctgcatggtagaagaatccggaaccttggaatcacaa
cttgaggcaaccaagcgcaagcaccaggagatccgggcaatgcgtagccagctgaagaag
attgaggacctgggcgcggccatggaggaggctctgatcctggacaacaagtacacagaa
cacagcacggtgggcctggcccagcagtgggaccagctagaccaactgggcatgaggatg
cagcacaacctggagcagcagatccaggccaggaacaccactggagtgacagaggatgcc
ctgaaggagttcagcatgatgttcaagcactttgacaaagagaagtctggccgtctgaac
caccaggagttcaagtcgtgtctgcgctcactgggttacgacctgcccatggtggaggag
ggagagccagacccagagtttgagtccatcctcgacactgtcgaccccaacagggatggc
aacgtgtccttgcaggagtacatggccttcatgatcagccgcgagacagagaacgtcaag
tccagcgaggagattgagagcgccttccgagccctcagcgtcgatgccaagccctacgtt
accaaggaggagctctaccagaatctgtccaaggaacaggcagactactgcatctcgcac
atgaagccctacctagacagcaagggccgggaaatgccctcggccttcgactttgtcgaa
ttcacccgctcactttttgtcaactga
DBGET
integrated database retrieval system
