Oncorhynchus mykiss (rainbow trout): 110523299
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Entry
110523299 CDS
T07259
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110523299 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110523299 (rapgef1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
110523299
NCBI-ProteinID:
XP_036832792
Ensembl:
ENSOMYG00000002532
LinkDB
All DBs
Position
5:complement(15149438..15225332)
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AA seq
1196 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQVEPVVKSQEKPVNKKV
SRLEEQEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARITHNSA
VSSCHNRVYQSLANLIRWSDHVMLDGINLDDKDNVVAVTTVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNRPPPPPITTPESRSELPLTEREREILSKTPLTEAVTDMAEEDVAPPKPPLP
GLKMDALSPPPALPPKKRQSASSPTRVAVVATMSRGSSLPCSVHSQQQDYEQEFLQRRFS
GGSQSYGCDSPRLSPYSSMGKLSRSEEQLCSMEQDSGQCSRNTSCETLDNTESYDPDYDF
LHQDLAVFTGDPSVVMSLSPLPESHSECSSPVPPHARFRSPPAPHQQQPHPPQSEYWTPQ
PGSHIIPLQLSRISAPPALPQKKRRSSQVSPYQDGCGSSGGPLNERSPSQYENLSEEELL
HPTPPFPLFTPNSPMPQSNGGVFVAQYLASENADLPSSPPPLPEKKNKHVLAYMQFVEDY
SEPQPSVFYQTPQNESIYEQRNKRFQDVYGLNDSFSSTDSVHEPLPIPLFPPPALPPKKR
QLASHSSSPSSSSLSCHLQPSLVVAAEEAGSGLGLILSVSSSSYLSGHASLTTPMSSDQV
ALSNATILDGSRGGPNGSLANSLGSVAISLLPPETTSLLTDSLLRTSAVSVDEGGEGEYV
NLYSSSQANGELELPPCLLRPIVADDVIQDPAPQMHSSNSKEALDKDSRRQKSTDSVQSD
EEEVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEVFLT
TYRTFISPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRLVDELCLVELTEDILKQ
LMDLVFRLVCNGELSLARVLRKNILDKVEQKKLLRCTNSLKPLAARGVSARPGTLHDFRS
HEIADQLTLLDAELFYNIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQE
KGQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLI
DSSSSFRVYRAALADVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFNILDS
MRRFQQVHYELKRNDDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKT
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaagcaagactcgcagcgctcccacctctcctccttcacc
atgaagctgatggacaagttccactctcccaagatcaagaggacgccatcaaagaagggc
aagcagttgcaggtcgaacctgtggtcaagagccaagagaaacccgtcaacaagaaggtg
agtcggctggaggagcaggagaaggaggtggtgagcgcgctgcgctacttcaagaccatc
gtggacaagatggtggtggagaagaaggtgctggagatgctgcctggctcggccagcaag
gtgctggaggctattctacctctggtgcaggtggaggcccggataacacacaattcggct
gtgtcgtcgtgtcacaaccgggtgtaccagagccttgccaacctgatccgctggtccgac
cacgtcatgctggacggcatcaaccttgatgacaaggacaacgtggtcgcggtcacgaca
gtcatcaaagccgtcctggatggggtcaaggagctggtcaaactcaccatagagaaacag
gagcaaccctcccccaccacacccaacagacccccaccaccacctatcactacaccagag
agcaggtcagagttgccactgacagaacgggagagggagatcctgagtaagaccccgctc
accgaggctgtgacggacatggcagaggaggacgtagctccgcccaaaccccccctccct
ggcctgaaaatggatgcgctcagccctcctccagctttgcccccaaagaagcgtcagtcg
gcctcgtcgcccacccgtgtggcagtggtggccaccatgagccgcggctccagcctgccc
tgcagcgtccacagtcagcagcaggactatgagcaggagttcctccagaggcgtttctca
gggggcagccagtcgtatgggtgcgactctccgcgcctctcgccctacagcagcatgggg
aagctcagcaggtctgaagagcagctctgctccatggaacaggacagtggacagtgctcc
agaaatactagctgtgagacactggacaacacagagagttacgaccccgactatgacttc
ctccaccaggacctcgctgtcttcacaggggacccctcagtggtcatgtccctgtccccc
ctccccgagtcccacagtgagtgctcctcccccgtgcctcctcacgcccggttcaggtca
ccacccgccccacaccaacaacaaccccacccaccccagtctgagtactggaccccccag
cccggttcccacatcatccccttgcaactgtcccgcatcagtgctcctccagcattaccc
cagaagaagcggcgcagctcccaggtttcaccttatcaggacgggtgtggctcctcgggg
ggacccctcaacgagaggtccccttcccaatacgaaaacctgtcggaggaggagctgctg
caccccacgccacccttccccctcttcactcccaactcgcccatgccccagagcaacggg
ggggtgttcgtggcccagtacctggctagcgagaacgcagacctgccctctagtccaccg
ccactgcctgagaagaagaacaagcacgtcctggcgtacatgcagtttgtggaggactac
tcagagccccagccctcagtgttctaccagaccccacagaatgagagcatctatgagcag
aggaacaaacgcttccaggacgtctatggcctcaacgactccttcagcagcaccgactcg
gtccacgagccccttcccatacccctcttcccgccccccgccctgccccccaagaagagg
cagctggcctcccactcttcctccccctcttcctcctctctgtcgtgccacctccagccg
tcattggtggtggcggcggaggaggcgggctctggcctaggcctcatcctatcggtttct
agctcctcctacctgagtggacatgcctcgctgaccacgcccatgagttcagaccaggtc
gccttgagcaatgccactatattggatggcagcaggggcgggcccaacggttccctggcc
aactcattgggctctgtggccatctctcttcttcctcctgagaccacttctcttctaact
gactctctcctccgcacctcggcagtgagcgtcgacgagggtggcgagggcgagtatgtc
aacctgtactcatccagccaggccaatggggagctggagctgcctccctgcctcctcaga
ccaatcgttgctgacgatgtcattcaagaccccgccccacaaatgcactcctccaatagc
aaggaggctctggacaaggacagcaggaggcagaagtcgacagactcagtccagagcgat
gaggaggaagtggatgagctctctctcatcgaccacaaagagatcatgtcccggataaca
ctcaaacaggagaatgacgatggacctgatgtgcgtgctggatcaggggatattctgtta
gtccacgccacagagacagaccgcaaagatctggtgttgtactgtgaggtcttcctgacc
acatacaggaccttcatcagcccagaggacctcattaagaagctccactacagatacacc
aggttctgtcacagtccagacacgtttaagaagcgggttagcaagaacaccttctttgtg
ctcgttagactggtggacgaactgtgtctggtggagttaacagaggacatcctgaagcag
ctgatggacctggtgttcaggctggtgtgtaacggcgagctgagcctggcccgcgtgctc
cgcaagaacatcctggacaaggtggagcagaagaagctgctgcgctgcaccaactccctc
aagccgctggccgcccggggcgtgtccgccaggcccggaacgctgcatgacttccgcagc
catgaaatcgcagatcagctcacgctcctggatgcagaacttttctacaacatcgagatt
cctgaggtgttgctttgggccaaggaacagaacgaagaaaagagtcccaatctgactcag
ttcacagagcactttaacaatatgagctactgggtgcgctctctaatcattcagcaggag
aaaggccaggacagagagaagctgctcctcaagttcattaagatcatgaagcacttaaga
aagttgaacaatttcaactcgtacttggcaatactgtctgccctggactcagcccccatc
cgcagactggagtggcagaaacagacatcagagggattggaggaatactgcactttgatt
gacagctcgtcgtctttccgagtgtaccgggcagctctggccgacgtggagcctccatgc
atcccatacctcggtctaatcctgcaggacctgaccttcgtccacctggggaaccctgat
ctcatcgatgggaaggtcaacttctctaagcgctggcagcagttcaacatcttggacagc
atgaggcgcttccagcaagtgcattatgagctgaagcgcaacgacgacattgtgtgcttc
ttcaacgacttcagcgaccacctggccgaggaggcgctgtgggagctctcactgaagatc
aagcctcgaaacatcacccggaggcggacagagcgcgaagagaagacctag
DBGET
integrated database retrieval system
