Oncorhynchus mykiss (rainbow trout): 110523325
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Entry
110523325 CDS
T07259
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110523325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110523325
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110523325
mRNA degradation factors
5'-3' decay
Lsm complex
110523325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
110523325
NCBI-ProteinID:
XP_021457593
Ensembl:
ENSOMYG00000005147
LinkDB
All DBs
Position
5:complement(16416981..16422022)
Genome browser
AA seq
147 aa
AA seq
DB search
MRFTSRPKMNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLQQTVERIHV
GKRYGDIPRGIFIVRGENVVLLGEIDLEKESDTSLQQVCIEDILEEQRLQQQSRQEAEKT
KHLALKERGLVMPRPDIMDEYGVQHQY
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaagccgaccaaaaatgaactacatgccaggaacagccagcctcatcgag
gatatcgataaaaaacatcttgtcctgctcagagatggaagaacgttgatcggctttctc
agaagcattgatcagtttgccaacctggtgctgcagcagacggtggagaggatccacgtg
ggcaagaggtatggagacatccctcgaggaatctttatcgtcaggggagagaacgtagtc
ctcctgggggagatcgacctggagaaggagagtgacaccagtctgcagcaggtgtgtatt
gaggacatcctggaggaacagcgactgcagcagcagagcaggcaggaggcagagaagacc
aaacacctggccctgaaggagagaggcctggtcatgcccagaccagacatcatggacgaa
tatggagtacagcaccaatactga
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integrated database retrieval system
