Oncorhynchus mykiss (rainbow trout): 110523365
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Entry
110523365 CDS
T07259
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00511
Other glycan degradation
omy00513
Various types of N-glycan biosynthesis
omy00520
Amino sugar and nucleotide sugar metabolism
omy00531
Glycosaminoglycan degradation
omy00600
Sphingolipid metabolism
omy00603
Glycosphingolipid biosynthesis - globo and isoglobo series
omy00604
Glycosphingolipid biosynthesis - ganglio series
omy01100
Metabolic pathways
omy04142
Lysosome
Module
omy_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110523365
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
110523365
00513 Various types of N-glycan biosynthesis
110523365
00531 Glycosaminoglycan degradation
110523365
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
110523365
00604 Glycosphingolipid biosynthesis - ganglio series
110523365
00511 Other glycan degradation
110523365
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110523365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
omy03110
]
110523365
Enzymes [BR:
omy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
110523365
Chaperones and folding catalysts [BR:
omy03110
]
Intramolecular chaperones
Others
110523365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
110523365
NCBI-ProteinID:
XP_021457671
Ensembl:
ENSOMYG00000000436
LinkDB
All DBs
Position
5:18396328..18410126
Genome browser
AA seq
545 aa
AA seq
DB search
MFATLKFAALLLAVVVCWATQDYDYNDAEIDEEPTLGDSPYGSLWPLPQKVKISTVVFKL
SGASFHIFDAKESSSGASCRLLQNAYRRYDEYIFTSSRKQGQNKSKKALASDMSELQVWI
TSADSECDSYPSVTSDESYKLSVDSPVAVLKAPKVWGALRGLETFSQLVYKDEYGAKSIN
RTDIHDFPRFAHRGLLLDTSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDPSFPYLSRT
FPQLSQHGAYHPYTHVYTPSDVKMIIEFARLRGIRVVPEFDTPGHTQSWGKGQKDLLTPC
YSGASPSGSFGPVNPMLNTTYDFMSMFFKEVNTVFPDAYVHLGGDEVDFSCWKSNPDIQK
FMEQQGFGMDYSKLESFYIQRLLDIITTTNKGYMIWQEVFDNGVKLKSDTVVHVWMGNKV
EEELQKVTEAGFTTILSAPWYLDYISYGQDWQKFYRAEPLSFKGTDAQKKLVIGGEACLW
GEYVDATNLTPRLWPRASAVGERLWSDRDVRDLNDAYSRLAKHRCRMVQRGIPAEPLFTG
YCAHE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaacgctgaagtttgcagcgttgttgctcgcggttgttgtctgctgggcaacg
caagattatgattataatgacgctgaaatagacgaggagcctactctgggtgattctcca
tatggatctctttggccgttgcctcagaaagtcaaaatatccacggtagtattcaaactc
agcggtgctagcttccatatattcgacgctaaagaatcgtcttctggtgcgagctgcaga
cttcttcaaaatgcatatcgaaggtatgatgagtacatctttaccagttccagaaaacaa
gggcaaaacaagagcaaaaaggcattggcctctgacatgtctgaattacaggtgtggatc
acatcagctgactctgagtgtgacagctaccccagtgtgacatctgacgagtcatacaaa
ctgtcagtggactctcctgttgctgtgctgaaagcacctaaggtgtggggagctctgaga
ggtctggagacttttagccagttggtgtataaggatgaatatggagcaaaaagcatcaat
aggacagacattcacgacttcccacggtttgcacatcgaggcctcttattggacacctct
cgtcacttcctgcccatcaaagtaattttagccaatctggaagccatggcgtggaacaaa
ttcaatgttttccactggcacatagtagatgacccctccttcccttacctgagccgtacc
ttcccccagctgagtcaacatggagcataccacccgtacacacatgtgtacacgccttct
gatgtgaagatgatcatcgagtttgctcgcctaaggggcattcgggttgtccctgagttt
gacacccctgggcacactcagtcatggggcaaagggcagaaggacctgctgaccccctgt
tactctggagccagcccctctggttcgttcggaccggtcaaccccatgctcaacaccacc
tatgacttcatgagcatgttcttcaaggaagtcaacacagtgttccctgatgcctacgtc
catctgggaggagatgaggtcgacttcagctgctggaagtccaaccctgacatccagaag
ttcatggagcagcaaggctttgggatggactacagcaagctggagtctttctacatccag
aggctcttggatatcatcaccactaccaacaagggctacatgatctggcaggaggtcttt
gacaacggtgttaagttgaagtcggacacggtagtgcatgtgtggatggggaacaaggtg
gaggaggagcttcagaaggtgacggaggcaggcttcaccaccatcctctccgccccctgg
tacctagactacattagctatggacaggactggcagaagttctacagagccgagccgctc
agtttcaagggcacagatgctcagaaaaagctggtgattggaggagaggcatgtctgtgg
ggagaatatgtggatgctaccaacctgacccctagactctggccccgtgccagtgctgtg
ggggagcggttgtggagtgacagggatgtgagggacctaaacgatgcctacagtcgtcta
gccaagcaccgttgtcgcatggtccagcgtggtatcccagctgagcctctctttacaggt
tactgtgcacatgagtga
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