KEGG   Oncorhynchus mykiss (rainbow trout): 110523403
Entry
110523403         CDS       T07259                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin C
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320  PPAR signaling pathway
omy04120  Ubiquitin mediated proteolysis
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110523403
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110523403
   04137 Mitophagy - animal
    110523403
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    110523403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110523403
Ubiquitin system [BR:omy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110523403
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 110523403
NCBI-ProteinID: XP_021457750
LinkDB
Position
5:complement(21172644..21175591)
AA seq 381 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatcttcgttaaaaccctgactggtaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gttaaaaccctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtgcttcgtctgaggggaggtatgcagatcttcgttaaaaccctg
actggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatcttcgttaaaaccctgactggtaagacc
atcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatctttgccggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaggagtccaccctccatcttgtgctccgt
ctgaggggaggtatgcagatcttcgttaaaaccctgactggtaagaccatcaccctcgag
gttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatctttgccggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaggagtccacccttcacctggtcctgcgtcttcgtggaggc
aactag

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