Oncorhynchus mykiss (rainbow trout): 110523403
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Entry
110523403 CDS
T07259
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110523403
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110523403
04137 Mitophagy - animal
110523403
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110523403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110523403
Ubiquitin system [BR:
omy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110523403
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
110523403
NCBI-ProteinID:
XP_021457750
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All DBs
Position
5:complement(21172644..21175591)
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AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaaaaccctgactggtaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gttaaaaccctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtgcttcgtctgaggggaggtatgcagatcttcgttaaaaccctg
actggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatcttcgttaaaaccctgactggtaagacc
atcaccctcgaggttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatctttgccggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaggagtccaccctccatcttgtgctccgt
ctgaggggaggtatgcagatcttcgttaaaaccctgactggtaagaccatcaccctcgag
gttgagcccagtgacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatctttgccggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaggagtccacccttcacctggtcctgcgtcttcgtggaggc
aactag
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integrated database retrieval system