Oncorhynchus mykiss (rainbow trout): 110523449
Help
Entry
110523449 CDS
T07259
Symbol
lhfpl2a
Name
(RefSeq) LHFPL tetraspan subfamily member 2a protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110523449 (lhfpl2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110523449 (lhfpl2a)
03037 Cilium and associated proteins [BR:
omy03037
]
110523449 (lhfpl2a)
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
110523449 (lhfpl2a)
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110523449 (lhfpl2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
Motif
Other DBs
NCBI-GeneID:
110523449
NCBI-ProteinID:
XP_021457813
Ensembl:
ENSOMYG00000001799
UniProt:
A0A8C7NDZ5
LinkDB
All DBs
Position
5:22942205..23007315
Genome browser
AA seq
225 aa
AA seq
DB search
MCHVIVTCRSMLWTLLSIVVAFGELIAFMSTDWLVGFPRTPDAVFGPHGATAAGEAYRPT
LGIYGRCIKLPHLRRGVLCGPYAVHFGEIASGFWQAAAIFLAAGILLLCAVAFISVFTMC
FQSIMKKSIFNVCGLLQAIAGLFLILGLMLYPAGWGSDKVQLYCGQDAAPYQAGLCTMGW
AFYTAMGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKSLICLL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacgtgatcgtgacctgtcgctccatgctgtggactctactcagcatcgtggtc
gccttcggagagctcatcgccttcatgagcaccgattggctggtgggcttcccccggaca
ccggacgccgtcttcggccctcatggtgccacagcggctggcgaggcctaccggcccacc
ctgggcatctacggccgctgcatcaagctgccccacttgcggcgcggtgtgctgtgtggg
ccgtacgccgtgcactttggggagatcgccagcgggttctggcaggcggcggccatcttc
ctggcggcgggcatcctgctgctgtgtgccgtggccttcatctctgtcttcaccatgtgc
ttccagagcatcatgaagaagagcatcttcaacgtgtgtggactgctgcaggccatcgca
ggtctgtttctgatcctgggtctgatgctgtaccctgcaggctggggttcagacaaggtg
cagctgtactgtggtcaggatgcggctccctaccaggcagggctgtgtaccatgggctgg
gccttctacacagccatgggaggcaccgtgctcaccttcatctgcgctgtgttctcagcc
caggccgagatcgccacgtcctcagacaaggtgcaggaggagatcgaggaaggcaagagc
ctaatctgcctgctctga
DBGET
integrated database retrieval system
