Oncorhynchus mykiss (rainbow trout): 110523452
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Entry
110523452 CDS
T07259
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110523452
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110523452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Harakiri
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110523452
NCBI-ProteinID:
XP_021457818
Ensembl:
ENSOMYG00000003096
LinkDB
All DBs
Position
5:23208733..23214815
Genome browser
AA seq
341 aa
AA seq
DB search
MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGVGPDPGHSGELA
PGPDTVEGTTMLPGDDINNGGSNPSGVQANSKEQQDKQQQNNSSQSGGSQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVTESRVQVWFQNRRAKWKKRK
KTTNVFRAPGTLLPTHHGLHSQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQL
PPALGRQHQHAMAQSLSQCSLSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASLSG
PTNVTSSPQLCSSPENDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctcctggatgctcgcctcggtgagttatcgtcgccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcagagctgctgggtcacagggaggct
ctgaagtgcaggctaggtggtggagttggacctgaccccggccactccggcgagctagcc
ccggggccagacaccgtggaggggaccaccatgctccctggagacgatatcaacaatggt
ggatccaacccttccggcgtgcaggccaacagtaaagagcaacaggacaagcagcagcag
aataactccagccaatccggaggaagtcagagtcagaaacagaagcgacaccggacccga
ttcactccagcccaacttaacgaactggagcgcagcttcgccaaaacgcactacccagat
atcttcatgagggaggaactggccctacggatcggcctaacggaatctcgcgttcaggta
acggaatctcgcgtgcaggtttggttccagaaccgacgcgccaagtggaagaagcgcaag
aagaccaccaacgttttccgcgctccgggaacgctgctgcccacccaccacggcctgcac
agtcagttcaactctgctgctgccgccgccgcggccatgggcgacagcctgtgctccttc
cacgccaacgacacccgctgggccacggcagggatgccaggcgtctctcagctgcagctc
cctccagccctgggtcgccagcaccagcatgccatggcgcagtccctgtcccagtgcagc
ctgtccggcccgccgcccaactccatggggctatccaacatgtcgtcgaacggatccgga
ctccagtctcacctctaccagaacccgttccccgggatggtcccggcctccctgtccggt
cccaccaacgtgacgagctctccccagctgtgtagctccccggaaaatgacgtctggaga
gggacgagcatcgcctccctgcggcgaaaagcgctggagcacacagtatccatgagtttt
acttag
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