Oncorhynchus mykiss (rainbow trout): 110523509
Help
Entry
110523509 CDS
T07259
Name
(RefSeq) POU domain, class 5, transcription factor 1 isoform X1
KO
K09367
POU domain transcription factor, class 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110523509
03021 Transcription machinery [BR:
omy03021
]
110523509
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110523509
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110523509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110523509
NCBI-ProteinID:
XP_021457936
Ensembl:
ENSOMYG00000020064
LinkDB
All DBs
Position
5:26365281..26369801
Genome browser
AA seq
469 aa
AA seq
DB search
MSERSQSPLSDCNSRTDDFSRPMYAQALSQEAFGGTSLQIPHGVLQHHSLIFNKTAYNGL
PPTPQTFFQFPPVGGDYRASDLQTGDFCQPKHWYPIAAPEYTGQVPRVAVTTQATNLSPP
IAEDREQIKMPDIKIEKDVNDEYEVKIQQYPTPSSAVAHGVYYSTPWNPSFWPGLPHITA
ESSNIQNLNSIPSTSSSTSPSLSPSPPSNGLPGITFNGSASQGAQAPQAQTQSNGSSSAS
GGCSDSEEEENPSTEELEQFAKELKHTRITLGFTQADVGMALGNLYGKMFSQTTICRFEA
LQLSFKNMCKLKPLLRRWLNEAETSDNPQDMYKIERVFVDTRKRKRRTSLEGSVRTALES
YFVKCPKPNTQDITHIADDLCLERDVVRVWFCNRRQKGKRLALPFDEECEEQYYEQSPPP
PHMTQSPLPGQGYHLSSHTGAPTFYMPPLQRPEVFKQALHPGLVGHLTS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgatctcagagccctctttcggattgcaacagccggacggatgacttcagc
cgacccatgtacgcccaggccttgagtcaagaagcgtttggaggcacgtcgctccagatc
cctcacggcgttctacagcaccacagtcttatattcaacaagactgcatacaatgggttg
cctccaacacctcaaacctttttccaattcccaccagtcggtggtgactatagggcctca
gatttacaaaccggtgacttttgccaacccaaacactggtatcccatcgccgctcccgaa
tacaccggccaagtaccgagggttgcagtgactacgcaggccacaaacctgagcccaccc
attgccgaagacagggaacaaatcaaaatgcctgatataaagattgagaaggatgtcaat
gacgagtatgaggtaaagattcaacagtatccaactccgtcgtccgctgtggctcacggg
gtttactactcgaccccatggaacccctcgttttggcccggccttccccacatcactgct
gagagttccaatattcaaaacctcaactccataccctcaacatcgtcttcaacatcccca
tcgctctcgccgtcaccccccagcaatgggttacccgggatcacgttcaacgggagcgca
agccaaggtgcccaagcgccccaggcgcaaactcaaagcaatggatcctccagcgccagc
ggtgggtgcagcgactcggaggaagaggagaacccttcaactgaggagctggaacagttc
gccaaggagctgaagcacacgcgtataacactgggtttcacacaagcagatgtaggaatg
gctctaggcaacctttatggcaagatgttcagccagactacaatctgtcgtttcgaagcc
ctccagctcagcttcaagaatatgtgcaagctgaagcccctgcttcggagatggctgaat
gaggctgagacctctgacaacccccaggatatgtacaagatcgagcgggtgtttgtggac
accaggaagaggaagcggcggaccagtctggagggttcggtgcgcacggctctagagtcc
tactttgtcaagtgccccaagcccaacacccaggacatcacacacattgcagatgacctg
tgtctggagagagatgtggtgcgtgtgtggttctgtaaccgcagacagaagggcaagcgc
ctggccctccctttcgacgaggagtgtgaagaacagtactacgaacagagtccacctccc
ccgcatatgacccaatcccccctccctgggcaggggtaccacctatccagccacaccggg
gcccccactttctacatgccccccctccagaggccagaagtctttaagcaggccctgcac
cctggactggtgggtcacctgaccagctaa
DBGET
integrated database retrieval system
