Oncorhynchus mykiss (rainbow trout): 110523519
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Entry
110523519 CDS
T07259
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110523519 (pus1)
Enzymes [BR:
omy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110523519 (pus1)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110523519 (pus1)
Prokaryotic type
110523519 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
110523519
NCBI-ProteinID:
XP_021457951
Ensembl:
ENSOMYG00000025918
LinkDB
All DBs
Position
5:26854071..26877217
Genome browser
AA seq
392 aa
AA seq
DB search
MMSEEGSGNMLIKPLKRVEEGNGESGENGHIRKKLKSVEPTGNERKHPKRKVVLLLAYSG
KGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQ
VVSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKD
YYTNNSAAFRLEPETLQRVNQLFGSYKGTHNFHNFTSQKAARDPSARRYITEMSCGEPFV
RGGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGL
VLEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECKEGSMASWMAT
LPIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagggtcaggaaatatgctgatcaagccactgaaacgagtggaggaa
ggaaatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaacca
actggcaatgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggc
aaaggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggat
gagctggtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatg
aaaaaaatgtcgttccaaagatgtgcgagaacagacaagggtgtttctgcagcaggtcaa
gtggtctctctaaaactgtggatgattgaagacgtaatggaaaagatcaactccaatctt
ccaccacagatcagagtgctgggtctgaaacgagtgactggcggcttcaattctaaaaac
agctgtgatgcccgcacatactcctacatgctccccactgtggccttctccccaaaggac
tattacaccaacaattccgctgcattccgccttgagccagagacactgcagagagtaaac
cagctgtttggcagctacaagggcacccataactttcacaacttcacctcccagaaggcc
gcgcgggaccccagcgcccgccgctacatcacagagatgtcctgtggcgagccctttgtg
cgtggcggcgccgagttcgcagagattactgtgcgtggccagagcttcatgatgcatcag
atccggaagatgatcggcctggtgatagctgtggtgaagggctattcgggggacgaagtg
ttaaagcgaagctggggtgaggagaaagtggatgtgccgaaagcccctgggctgggcctg
gtactggagaaggtgcactttgacaggtacaacaagcggtttggtggggacggcctccat
gagtgcctggagtggactgaagaggagcaggccatcttggctttcaaggaggagcacatc
taccccagcattgtggagacagagtgcaaggaagggtccatggctagctggatggccaca
ctgcccatacatgactttgaggcaactgcaacaggagcgcaggataaggacagggagcag
gatgatgaggagggtaatagatcagattctgcactttga
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