Oncorhynchus mykiss (rainbow trout): 110523536
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Entry
110523536 CDS
T07259
Name
(RefSeq) neurofilament medium polypeptide isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110523536
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
110523536
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
110523536
NCBI-ProteinID:
XP_036833076
Ensembl:
ENSOMYG00000028891
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All DBs
Position
5:complement(28141509..28197809)
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AA seq
1280 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSYKRSVNVPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHHDKAQIQLDTDHVEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSELEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAAQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHSSDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRHTVTSSKKSKYEPP
KLKVQHKFVEEIIEETRVEDEKDEMDQALAEMAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAQVSSSTPAEEEEEDKEGDDEEEEGEKEEEGEKGEEGEGEKGDE
GEGEGELEETVLCSKAPESKASPDKEKAGEKEGSSGEEETGEGEGEEEGDDQDEDAGSDK
GSKDGDDKDEEDEKKGKDEKEYKTDEKAAVAKTEAPKTEAPKSEAPKVEVQKSETSKPSK
PDSLKAESPKAGSPKSESPKVGSPKHESPKAVTPKSESPKPAGSPKSESPKPAGSPKSES
PKPAGSPKSESPKPAGSPKSESPKPSGSPKSESPKPAGSPKSESPKLAGSPKSESPKPAG
SPTSESPKPAGSPKSAGSPKSESPKPTGSPKSESPKPAGSPKSESPKPSGSPKSESPKPS
GSPKSESPKPAGSPKSESPKLAGSPKSESPKPAGSPKSESPKPAGSPKSESPKPAGSPKS
ESPKPAGSPKSESPKPSGSPKSESPKPAGSPKSESPKLAGSPKSESPKPAGSPTSESPKP
AGSPKSAGSPKSESPKPAGSPKSESPKPAGSPKSESPKPSGSPKSESPKPSGSPKSESPK
PAGSPKSESPKLAGSPKSESPKPAGSPTSEFPKSAGSPQSESPKPAGSPTSESPKPAGSP
KSESPKPAGSPKSESPKPTVSPKSESPNLGSPEAEGEKGEEGEGEKGDDAPKPEAPMSEA
PKAAEEKVDKKSDSEEERKVEKKDAAMNGDVEKITPEDKDKKDEGGKEAEEKDVISNGVD
ESPTKDDPDQKDDPKDQKVVITKTVETITTGEDGAKHVTKSVTVTETVKESEDVMQEKTV
SSKKMEKHSSQSVKVVTETE
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccattcaggagaagtatggatagtagg
accacctacggccgctccactggcacaccctccagcgggttccgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatgtgccggta
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccagatcgaagaggag
atccagacgctgcggcagaagcaggtgtcacaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccacgataaagcgcagatccag
ctcgacacggaccacgtcgaggatgacatccagagaattagggaccgcttcgatgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagttggagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctgttcgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactctaaccagaacctgcagcaggtggaggactggttc
atgtgccgctattccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgtcgccagcttcagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
agcagcgacttgtccagcctgcaggagaccatccaccagctggataatgagcttaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtcaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctaccgccacaccgtcacctcctctaagaagtccaagtatgagcctccc
aaactgaaagtccagcataagtttgtagaggagatcatcgaggagaccagggtagaggat
gagaaggatgagatggaccaggccctggctgagatggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagcccaagttagc
tccagcacacctgctgaggaggaagaggaggacaaagaaggtgatgatgaagaggaagag
ggagaaaaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgag
ggagaaggagagggggaattagaggagacagtcctgtgctctaaagccccagaatcaaag
gcctctcctgacaaagagaaggctggagagaaggagggaagcagtggagaagaggagaca
ggagagggagagggagaagaggagggtgatgatcaagatgaagatgcaggtagtgacaaa
ggatccaaagatggagatgataaggatgaggaagatgagaagaaaggaaaggatgagaaa
gaatacaaaacagatgagaaggcagctgtagccaagacagaggctcccaaaacagaagcc
cccaagagtgaggccccaaaagttgaggtccagaaatctgagacctcaaagccctccaag
ccagactccctaaaagctgaatccccaaaggctgggtcccccaagtctgagtcaccaaaa
gttggatccccaaaacatgaatctcccaaagctgtaacccccaaatctgaatccccaaaa
cctgctggatcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatcc
ccaaaacctgctggatcccccaaatctgaatccccaaaacctgctggatccccaaaatct
gaatccccaaaaccttctggatcccctaaatctgaatcaccaaaacctgctggatcccct
aaatctgaatccccaaaacttgctggatcccctaaatctgaatccccaaaacctgctgga
tcccctacttctgaatccccaaaacctgctggatcccctaaatctgctggctcccccaaa
tctgaatccccaaaacctactggatcccccaaatctgaatccccaaaacctgctggatcc
cccaaatctgaatccccaaaaccttctggatcccccaaatctgaatccccaaaaccttct
ggatcccctaaatctgaatccccaaaacctgctggatcccctaaatctgaatccccaaaa
cttgctggctcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatcc
ccaaaacctgctggatcccccaaatctgaatccccaaaacctgctggatcccccaaatct
gaatccccaaaacctgctggatcccccaaatctgaatccccaaaaccttctggatcccct
aaatctgaatcaccaaaacctgctggatcccctaaatctgaatccccaaaacttgctgga
tcccctaaatctgaatccccaaaacctgctggatcccctacttctgaatccccaaaacct
gctggatcccctaaatctgctggctcccccaaatctgaatccccaaaacctgctggatcc
cccaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaaccttct
ggatcccccaaatctgaatccccaaaaccttctggatcccctaaatctgaatccccaaaa
cctgctggatcccctaaatctgaatccccaaaacttgctggatcccctaaatctgaatcc
ccaaaacctgctggatcccctacttctgaattccccaaatctgctggatcccctcaatct
gaatccccaaaacctgctggatcccctacttctgaatccccaaaacctgctggatcccct
aaatctgaatccccaaaacctgctggctcccccaaatcggaatccccaaaacctacagta
tcccccaaatctgaatcccccaatttaggatcccccgaggcagagggtgagaaaggagaa
gagggtgagggtgagaagggagatgatgcccccaaaccagaagctccaatgtcagaggcc
cccaaggctgcagaagagaaagtagacaaaaagagtgattcagaggaagagaggaaggta
gaaaagaaagacgcagccatgaacggagatgtggagaagattaccccagaggacaaggac
aagaaggatgagggtgggaaagaggcagaggagaaggatgttatctcaaatggagtggac
gagagccccactaaagatgacccggaccagaaagatgatccaaaggaccagaaggtggtc
atcaccaaaacggtggagaccatcaccactggagaggacggggccaagcatgtcaccaaa
tcggtcactgtcaccgagactgtaaaggagtctgaggatgtgatgcaggagaagacagtc
tccagcaagaagatggagaaacactcttcccagtctgtcaaggtggtgactgaaactgag
taa
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