Oncorhynchus mykiss (rainbow trout): 110523618
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Entry
110523618 CDS
T07259
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 14 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110523618 (lrrc29)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110523618 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box
F-box-like
LRR_At5g56370
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box_5
Motif
Other DBs
NCBI-GeneID:
110523618
NCBI-ProteinID:
XP_021458156
Ensembl:
ENSOMYG00000016185
LinkDB
All DBs
Position
1:complement(44787137..44792832)
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AA seq
651 aa
AA seq
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MGEITMETPELPLEIVTYILSFLKASDRKEASLVCWSWYDASQDLQFQRNDTFKFPASIS
SLDLIRGLSRRSRCSLVISHLDGSSMSRAVLQEIGLHLGPRLESLALPGSSVTESSLLAL
LPHLTALRRLDLRGLDSLFMSGAFLSKEEHRQQVGVALAGLEELDLSDLRYLSDLTFNRL
TGCTLRLRRLSLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSR
TSITPESLRSVAQVGGLSLEELRLRGCKELTDYSVEVLCKHQPGLRILDLSACTELTSRA
VLAVALSLKGLRFLSLSRDWRMTDKGLADLMMLPELRNLDLSECLHVSGAEIVKGLSALE
PRARLETLSFKSCTYIRVSDLAVFSLARLLGSSLRELDLTSCVYLTDLSVRAIATYLPGL
VVLRLGWCKEITDWGLLGMVELTKECEPSKEMEDKGPSFTRTFGNMGFFRPPSMPFQEKP
RLVTDEDLGVFKEQDGSSLLALRSLQELDLSACSKLTDSSITQVLRYPDLQRLSLSMLPE
ISDDSLASVAYHCRSLTSLALSHCPQISDQGIARAAPYLARLQHLYLSCCDAVTDRSLSM
LVQHCKRLRTLDISMCKDISITTVDLLQSQLPFLENVHCRFVGGADLTLTL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaataaccatggaaacgcctgagttacctcttgagatcgtcacctacatccta
agtttcctcaaagcatcagacaggaaggaagcctctctggtctgctggagctggtatgat
gcgagccaagacctccaatttcagaggaatgacaccttcaagttcccagcctctatctcc
tccctggatctgatccggggcctgagtaggcgttcccgctgcagcctggtcataagccat
ctggatgggtccagtatgtcccgggctgtgcttcaggagatagggctccatctaggccct
cggctggagagcctggccctgccaggaagcagcgtgaccgagtcttccctcctggccctg
ctgccccacctgaccgccctgcgcaggcttgacctccgtggcctggacagcctcttcatg
tctggagccttcctgtccaaagaagagcaccgccagcaggtgggggtagctttagcaggt
cttgaggagctggatctctctgacctgcgctatctatcagatctcaccttcaaccgactc
acaggctgcactctcagacttcgccgtctctccctggccggctgccacatcgcctttgag
tttgacccgtaccgtggctgccccgtggggcctgactcctctgccctgctctccctacgt
aacctccgcaggttgctgcaggagcaggcctccaccgtgcgggggctggacctgagcaga
actagcatcaccccagagtcgctgcgctccgtggcccaggtagggggcctgtctctagag
gagctgcgtctgcggggctgcaaggagctgacagactactctgtggaggtgctctgcaag
caccagcctggcctccggatcctggacctcagcgcctgtacagagctcaccagccgggct
gtactggctgtggccctgagcctgaagggcctccggttcctctctctgtcccgggactgg
aggatgacggataaagggctggccgacctgatgatgctgccggagctgaggaacctggat
ctgtctgagtgcctgcatgtcagtggggctgagatagtgaaagggctctctgccctggag
cccagggcacggttggagacactcagcttcaagagctgcacctatatcagagtcagtgat
ctggctgtgttctctctggctcggctgctgggctccagtttgcgggagctggacctcacc
tcctgcgtctacctcacagacctgagcgtgcgcgctatcgccacctacctgcccgggctg
gtggtgctgcgactgggctggtgcaaggagatcacagactgggggctgctgggcatggtg
gagctcaccaaggagtgtgagcccagcaaggaaatggaggacaaggggcccagcttcacc
cgtacttttggaaatatgggtttcttccggcctcccagcatgcccttccaggagaagccc
cggctggtgacggacgaggacctgggggtgttcaaggaacaggacgggtcctcactgctg
gccctcaggagcctccaggagctcgacctgtctgcctgctccaaactcactgacagcagc
atcacacaggtgctgcgttatccagacctccagcgcctctctctctccatgctgcctgag
atcagtgatgacagcctggcgtcggtggcctaccactgccgcagcctcaccagcctggca
ctcagccactgcccccagatcagtgaccagggtatcgcccgcgccgccccctacctcgcc
aggctgcagcacctctatctgtcctgctgcgacgcagtcacggataggtctctctccatg
ctcgtccaacactgtaagagattgcggacgctggacatctccatgtgtaaagacatctcc
ataacaacagtggacctcctccaatcccagctgcccttcctagagaatgtccactgccgc
tttgtgggcggagctgacctgaccctcacactctga
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