Oncorhynchus mykiss (rainbow trout): 110523630
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Entry
110523630 CDS
T07259
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110523630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110523630
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110523630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
110523630
NCBI-ProteinID:
XP_021458176
Ensembl:
ENSOMYG00000016282
LinkDB
All DBs
Position
1:complement(44793384..44810380)
Genome browser
AA seq
849 aa
AA seq
DB search
MPKQQQQNLDLEMDHLIRQVPLHHRTPSPSSPNSTLEMPNVPSYPQLPPISLSRQLSGLS
NPAFHIEDDPTSARSSASSRLSVHPAVNVEDVDSGGGGHRRHIRQILTPQDPNLKTLTVP
RVSKASRQSKVADKEKNLHSQSEDDDEEETETAVRAWPSQSSILSGDDGLKERPASSASQ
ASYVVNERLQELVKMFKERTERAKEKLIDPDDSDDDSPTASPARAPTPPPAPPEEPEEEA
QPASPEREMEEQQPQSRLCCKVTPPRWIRALLQYRFPSSIDPFTNLVYVLWLFFVTLAWN
WNVWLIPMRWAFPYQTPSNIYLWLLADYLCDLIYILDIMVFQPRLQFVRSGDIVFDKKDM
RKNYMKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKVMSFFEFNDRLEAILTKAYV
YRVIRTTSYLLYCLHCNACLFYWISAYEGLGSTKWVYDGKGNSYIRCYYFAVKTLITIGG
LPEPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRACMDNTVKYMASYR
IPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCDR
QMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLKSGSVF
GEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKARNMLTKDK
KPQEPLKEPAQVIPPRTETPKLLKAALEMAHQKTGLKRTLAKIKENTNISSISLQPSMSS
SLTPLSPVSPVSSLDPERKSSIMSPTSDSSTLLRPASHCHRGETLSKEQDNVAEEEAGES
GKRKEKRKP
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcagcagcagcagaatcttgacctggagatggaccacctgatccgccaggtc
cccctccaccaccgcaccccctccccgtcctcccccaatagtaccctggagatgcccaac
gtgccctcctacccccaactgccccccatcagcctgtccaggcagctgtcagggctttcc
aaccccgccttccacatcgaggacgaccccacgtccgctcggtcctcagcgagctccagg
ctcagtgtgcaccctgctgtcaacgtggaggacgtggattcaggcggaggggggcaccgt
cgacacattcgccaaatcctcaccccccaggaccccaacctcaagaccctgaccgtaccc
agagtctccaaagccagccgccagagcaaagttgccgataaagaaaagaacctgcactct
cagagtgaggatgatgatgaagaggagactgagaccgcagtgagggcgtggcctagccag
tccagcatcctcagtggagacgatgggctaaaggagcggccagcgtcgtccgctagccag
gccagctacgtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagaggaca
gagagggccaaagagaaactcatagacccagatgactctgatgatgacagtcccactgcc
tcccctgcgagagctccaacacctcctcctgcgcctccagaggagccggaggaggaagca
caaccagcctcccctgagagggagatggaggagcagcaaccccagtctagactgtgttgc
aaggtgacgcctcctcgctggatcagagccctgcttcagtaccgcttcccctctagcatc
gaccccttcaccaatctggtctatgtgctgtggctatttttcgtcaccttggcgtggaac
tggaacgtgtggctgatcccgatgcgctgggccttcccctaccagacccctagtaacatc
tacctgtggctgctagccgactacctgtgtgacctcatctacatcctggatatcatggtc
ttccagccccgcctgcagtttgtccgcagtggcgacatagtgtttgacaaaaaggacatg
cgaaagaattacatgaaaactttccggttcaagatggatgtgatcagtcttgtgccactg
gaattgttctattttaaaactgggatcaacccactcctccgcttcccacggctactaaag
gtaatgtctttcttcgagttcaacgaccgtcttgaggccatcctgaccaaagcctatgtt
tacagagtgatccggaccaccagctacctgctgtactgcctccactgtaacgcctgtctg
ttctactggatctctgcgtatgaaggtctgggctccacaaagtgggtctatgatggaaag
ggcaacagttacatccgctgctactactttgctgtgaagactctgatcaccattggtgga
ctgccggagcccacaacgctctttgaaatcatctttcagctcatcaactactttgtagga
gtgtttgccttttccatcatgataggacagatgagagatgtggttggtgcagccacttcc
ggacagacgtactacagagcatgcatggacaacactgtcaaatacatggcctcctaccgt
atccccaaagacgttcaaaaccgggtcaaaacctggtacaactacacctggcagtcccag
ggcatgctggatgaacaggagcttctggtccagctcccagacaagatgaggctggacatc
gctgtggatgtcaactatgacattgtcagtaaagtctctctcttccagggttgcgacaga
cagatgatctttgacatgttaaagagtctgaggtctgtcgtttacctcccgggggactat
gtctgcaaaaagggcgaggttggacgggagatgtacatcatcaaggccggggaggtgcag
gtggtgggcgggccagacggaaagaccgtgtttgtcacactgaagtccgggtcagtgttt
ggggaaatcagcttgcttgcagtgggtggaggaaacaggagaacagccaacgtagtggct
catggcttcgccaacctgttcatcctggacaagaaggacctcaatgagattttagtgcat
taccccgagtctcagaagctgctccgcaagaaggccaggaatatgctgacaaaagacaag
aagcctcaggagcctctgaaggagccggcccaggtgatccctcctcggacagagacaccc
aagctactcaaagctgctctggagatggctcatcagaaaacaggcctcaaaaggaccctt
gcaaagattaaggagaacaccaacatatccagtatttcgctacagccctcaatgtcctcc
tccctgacccccctgtccccagtctctccagtctccagtctggacccagagcgcaagtct
agcatcatgtctccaacctcagacagctccacgttgctccgccccgcctcccattgtcac
agaggggagacgctgtccaaggagcaagacaacgtggcggaagaagaggcaggagagagt
gggaagaggaaagaaaagagaaagccatga
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